Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL2G02650
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G62820 | Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G12310.1); Has 16075 Blast hits to 13795 proteins in 1483 species: Archae - 0; Bacteria - 30; Metazoa - 6203; Fungi - 4627; Plants - 3186; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). | 1 | - | View |
| AT1G12310 | Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G49690 | No description available. | A09 | + | View |
| BR06G08590 | No description available. | A06 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV5G08990 | No description available. | Bvchr5.sca002 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL10G03100 | No description available. | Chr10 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00021G03010 | No description available. | CM3.5_scaffold00021 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00029G00890 | No description available. | supercontig_29 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G11380 | No description available. | scaffold_1 | - | View |
| CRU_002G02050 | No description available. | scaffold_2 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00040G01000 | No description available. | scaffold00040 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0002G04450 | No description available. | scaffold_2 | + | View |
| EG0004G20300 | No description available. | scaffold_4 | - | View |
| EG0004G16210 | No description available. | scaffold_4 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV5G00780 | Probable calcium-binding protein CML13 (putative) | LG5 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM17G14380 | No description available. | Gm17 | - | View |
| GM01G42090 | No description available. | Gm01 | - | View |
| GM11G03280 | No description available. | Gm11 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR06G21190 | No description available. | Chr06 | + | View |
| GR08G23940 | No description available. | Chr08 | - | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ2G035020 | No description available. | chr2 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME07035G00920 | No description available. | scaffold07035 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_005G08720 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT03G11500 | No description available. | Chr03 | - | View |
| PT01G11790 | No description available. | Chr01 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30190G01840 | No description available. | 30190 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0003G25810 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G10930 | similar to AT1G12310|calmodulin, putative | ch1-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV02G00910 | name=GSVIVG01004914001; | chr2 | + | View |