Anchorpoints
- Gene id
- AL2G01300
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G36350 | No description available. | scaffold_7 | + | View |
AL4G34020 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G75440 | ubiquitin-conjugating enzyme 16 (UBC16); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0; Bacteria - 2; Metazoa - 3895; Fungi - 1929; Plants - 1614; Viruses - 20; Other Eukaryotes - 1336 (source: NCBI BLink). ubiquitin-conjugating enzyme 16 | 1 | + | View |
AT1G63800 | ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). ubiquitin-conjugating enzyme 5 | 1 | - | View |
AT2G46030 | Ubiquitin conjugating enzyme E2 ubiquitin-conjugating enzyme 6 (UBC6); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 5 (TAIR:AT1G63800.1); Has 8701 Blast hits to 8700 proteins in 389 species: Archae - 0; Bacteria - 2; Metazoa - 3940; Fungi - 1759; Plants - 1590; Viruses - 20; Other Eukaryotes - 1390 (source: NCBI BLink). ubiquitin-conjugating enzyme 6 | 2 | - | View |
AT5G41340 | ubiquitin conjugating enzyme 4 (UBC4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 5 (TAIR:AT1G63800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ubiquitin conjugating enzyme 4 Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 5 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G07300 | No description available. | Bvchr5.sca002 | + | View |
BV1G06370 | No description available. | Bvchr1.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G01720 | No description available. | Chr5 | + | View |
CL01G02360 | No description available. | Chr1 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G06650 | No description available. | CM3.5_scaffold00005 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00214G00120 | No description available. | supercontig_214 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G32800 | No description available. | scaffold_7 | + | View |
CRU_002G21060 | No description available. | scaffold_2 | + | View |
CRU_002G01080 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00009G01150 | No description available. | scaffold00009 | - | View |
CS00002G04760 | No description available. | scaffold00002 | + | View |
CS00001G03290 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G05500 | No description available. | scaffold_5 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G03160 | Ubiquitin-conjugating enzyme E2 4 (similar to) | LG5 | - | View |
FV7G07620 | Ubiquitin-conjugating enzyme E2-23 kDa (similar to) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G01940 | No description available. | Gm08 | - | View |
GM18G46940 | No description available. | Gm18 | - | View |
GM16G03940 | No description available. | Gm16 | + | View |
GM07G07540 | No description available. | Gm07 | + | View |
GM05G37650 | No description available. | Gm05 | + | View |
GM09G39370 | No description available. | Gm09 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G19840 | No description available. | Chr09 | - | View |
GR03G15730 | No description available. | Chr03 | + | View |
GR08G24800 | No description available. | Chr08 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G015390 | No description available. | 12 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03614G00550 | No description available. | scaffold03614 | + | View |
ME02658G01120 | No description available. | scaffold02658 | + | View |
ME03581G01620 | No description available. | scaffold03581 | + | View |
ME05280G00330 | No description available. | scaffold05280 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G098595 | ubiquitin-conjugating enzyme | chr8 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G38170 | No description available. | scaffold_1 | - | View |
PPE_002G16830 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G12970 | No description available. | Chr03 | - | View |
PT02G16100 | No description available. | Chr02 | - | View |
PT05G23210 | No description available. | Chr05 | + | View |
PT14G08660 | No description available. | Chr14 | - | View |
PT02G03080 | No description available. | Chr02 | - | View |
PT01G10190 | No description available. | Chr01 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G04560 | No description available. | 30170 | + | View |
RC30190G04120 | No description available. | 30190 | - | View |
RC30174G03060 | No description available. | 30174 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G094810 | Ubiquitin-conjugating enzyme (AHRD V1 **** D2VN46_NAEGR)%3B contains Interpro domain(s) IPR015581 Ubiquitin-conjugating enzyme | ch01 | - | View |
SL04G080810 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch04 | - | View |
SL08G081270 | Ubiquitin-conjugating enzyme (AHRD V1 ***- D2VN46_NAEGR)%3B contains Interpro domain(s) IPR015581 Ubiquitin-conjugating enzyme | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G034210 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr04 | - | View |
ST01G032200 | Ubiquitin-conjugating enzyme h (AHRD V1 **** E9DYP4_9HYPO); contains Interpro domain(s) IPR015581 Ubiquitin-conjugating enzyme | chr01 | - | View |
ST08G029150 | Ubiquitin-conjugating enzyme h (AHRD V1 **** E9DYP4_9HYPO); contains Interpro domain(s) IPR015581 Ubiquitin-conjugating enzyme | chr08 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G02510 | No description available. | scaffold_1 | + | View |
TC0001G35410 | No description available. | scaffold_1 | + | View |
TC0003G27750 | No description available. | scaffold_3 | - | View |
TC0008G03300 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G30590 | similar to AT1G75440|UBC16 (ubiquitin-conjugating enzyme 16) | ch5-7 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G09560 | name=GSVIVG01009784001; | chr18 | - | View |
VV02G03390 | name=GSVIVG01019387001; | chr2 | + | View |
VV15G05160 | name=GSVIVG01026953001; | chr15 | + | View |