Anchorpoints
- Gene id
- AL2G00770
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G41700 | One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 ubiquitin conjugating enzyme 8 (UBC8); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 28 (TAIR:AT1G64230.2); Has 10671 Blast hits to 10632 proteins in 401 species: Archae - 0; Bacteria - 4; Metazoa - 4624; Fungi - 2337; Plants - 1940; Viruses - 26; Other Eukaryotes - 1740 (source: NCBI BLink). ubiquitin conjugating enzyme 8 | 5 | + | View |
AT1G75440 | ubiquitin-conjugating enzyme 16 (UBC16); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0; Bacteria - 2; Metazoa - 3895; Fungi - 1929; Plants - 1614; Viruses - 20; Other Eukaryotes - 1336 (source: NCBI BLink). ubiquitin-conjugating enzyme 16 | 1 | + | View |
AT1G64230 | ubiquitin-conjugating enzyme 28 ubiquitin-conjugating enzyme 28 (UBC28); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.5); Has 10460 Blast hits to 10419 proteins in 398 species: Archae - 0; Bacteria - 4; Metazoa - 4543; Fungi - 2213; Plants - 1965; Viruses - 26; Other Eukaryotes - 1709 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G12350 | No description available. | A09 | - | View |
BR09G11740 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV1G08640 | No description available. | Bvchr1.sca001 | + | View |
BV5G06520 | No description available. | Bvchr5.sca002 | - | View |
BV1G05600 | No description available. | Bvchr1.sca001 | - | View |
BV3G02680 | No description available. | Bvchr3.sca003 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G00500 | No description available. | Chr1 | - | View |
CL01G01940 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G07100 | No description available. | CM3.5_scaffold00005 | + | View |
CM00005G08510 | No description available. | CM3.5_scaffold00005 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00122G00250 | No description available. | supercontig_122 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G21060 | No description available. | scaffold_2 | + | View |
CRU_007G32440 | No description available. | scaffold_7 | - | View |
CRU_002G00590 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G04760 | No description available. | scaffold00002 | + | View |
CS00009G01850 | No description available. | scaffold00009 | + | View |
CS00001G03970 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G07080 | No description available. | scaffold_5 | + | View |
EG0011G02880 | No description available. | scaffold_11 | + | View |
EG0004G14250 | No description available. | scaffold_4 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G04520 | SUMO-conjugating enzyme UBC9 | LG5 | + | View |
FV7G06360 | Ubiquitin-conjugating enzyme E2-17 kDa (similar to) | LG7 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR04G13590 | No description available. | Chr04 | - | View |
GR09G19840 | No description available. | Chr09 | - | View |
GR07G10550 | No description available. | Chr07 | + | View |
GR03G08250 | No description available. | Chr03 | - | View |
GR08G25210 | No description available. | Chr08 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G015390 | No description available. | 12 | - | View |
MD01G021320 | No description available. | 1 | + | View |
MD07G019500 | No description available. | 7 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03581G01040 | No description available. | scaffold03581 | - | View |
ME06089G00360 | No description available. | scaffold06089 | - | View |
ME05280G01080 | No description available. | scaffold05280 | - | View |
ME00341G00290 | No description available. | scaffold00341 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G38170 | No description available. | scaffold_1 | - | View |
PPE_005G12260 | No description available. | scaffold_5 | + | View |
PPE_002G17660 | No description available. | scaffold_2 | + | View |
PPE_002G29330 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT12G03300 | No description available. | Chr12 | - | View |
PT05G23210 | No description available. | Chr05 | + | View |
PT02G03080 | No description available. | Chr02 | - | View |
PT01G09490 | No description available. | Chr01 | - | View |
PT03G13620 | No description available. | Chr03 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G04560 | No description available. | 30170 | + | View |
RC30190G04990 | No description available. | 30190 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G095490 | Ubiquitin-conjugating enzyme E2 8 (AHRD V1 **** UBC8_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch01 | + | View |
SL08G008220 | Ubiquitin-conjugating enzyme E2 10 (AHRD V1 ***- UBC10_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch08 | + | View |
SL08G081950 | Ubiquitin-conjugating enzyme E2 10 (AHRD V1 **** UBC10_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch08 | + | View |
SL04G080810 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G034210 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr04 | - | View |
ST08G028440 | Ubiquitin-conjugating enzyme (AHRD V1 **** E9BXA2_9EUKA); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr08 | - | View |
ST01G032940 | Ubiquitin-conjugating enzyme (AHRD V1 **** E9BXA2_9EUKA); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G34510 | No description available. | scaffold_1 | - | View |
TC0003G19240 | No description available. | scaffold_3 | + | View |
TC0003G28690 | No description available. | scaffold_3 | + | View |
TC0008G03300 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G30590 | similar to AT1G75440|UBC16 (ubiquitin-conjugating enzyme 16) | ch5-7 | + | View |
TP2G00510 | similar to AT1G64230|ubiquitin-conjugating enzyme, putative | ch2-1 | - | View |
TP7G00370 | similar to AT5G41700|UBC8 (UBIQUITIN CONJUGATING ENZYME 8) | ch7-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV16G06940 | name=GSVIVG01028729001; | chr16 | - | View |
VV02G04240 | name=GSVIVG01019484001; | chr2 | + | View |
VV18G09560 | name=GSVIVG01009784001; | chr18 | - | View |