Anchorpoints

Gene id
AL1G49560
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G55060ubiquitin 12 (UBQ12); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 3 (TAIR:AT5G03240.3); Has 19950 Blast hits to 7287 proteins in 722 species: Archae - 0; Bacteria - 57; Metazoa - 9247; Fungi - 2282; Plants - 4139; Viruses - 488; Other Eukaryotes - 3737 (source: NCBI BLink). Ubiquitin-like gene, believed to be a pseudogene because of amino acid substitutions in 3 of the 5 ubiquitin repeats found in the UBQ12 gene product ubiquitin 121+View
AT1G53930Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.6); Has 11184 Blast hits to 6096 proteins in 709 species: Archae - 0; Bacteria - 19; Metazoa - 4709; Fungi - 1331; Plants - 2917; Viruses - 171; Other Eukaryotes - 2037 (source: NCBI BLink). Ubiquitin-like superfamily protein1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G41140No description available.scaffold_1-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G17700No description available.Chr10+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G018230polyubiquitin 3chr8+View


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Gene id
Species
Description
Chromosome
Strand