Anchorpoints
- Gene id
- AL1G48300
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G53230 | Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterochronic regulation of leaf differentiation. 'TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3' (TCP3); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1510 Blast hits to 1508 proteins in 333 species: Archae - 0; Bacteria - 12; Metazoa - 43; Fungi - 12; Plants - 1439; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 | 1 | - | View |
AT3G15030 | TCP family transcription factor 4 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. TCP family transcription factor 4 (TCP4); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1); Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 13; Plants - 1470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G01450 | No description available. | A08 | + | View |
BR05G28010 | No description available. | A05 | - | View |
BR03G34240 | No description available. | A03 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G11370 | No description available. | Chr7 | - | View |
CL11G11590 | No description available. | Chr11 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00081G00450 | No description available. | CM3.5_scaffold00081 | - | View |
CM00027G00340 | No description available. | CM3.5_scaffold00027 | - | View |
CM00001G07540 | No description available. | CM3.5_scaffold00001 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00131G00690 | No description available. | supercontig_131 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G13950 | No description available. | scaffold_3 | + | View |
CRU_001G40470 | No description available. | scaffold_1 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G09770 | No description available. | scaffold_6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM12G20160 | No description available. | Gm12 | + | View |
GM13G34690 | No description available. | Gm13 | + | View |
GM12G35720 | No description available. | Gm12 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G37300 | No description available. | Chr09 | + | View |
GR02G06450 | No description available. | Chr02 | + | View |
GR13G17280 | No description available. | Chr13 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G023410 | No description available. | 11 | - | View |
MD10G005340 | No description available. | 10 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03741G00660 | No description available. | scaffold03741 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G078200 | TCP family transcription factor | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G16380 | No description available. | scaffold_4 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G062680 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--* CYCLD_ANTML)%3B contains Interpro domain(s) IPR017887 Transcription factor TCP subgroup | ch07 | + | View |
SL12G014140 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch12 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G024550 | Transcription factor (Fragment) (AHRD V1 *--* D6MK40_9ASPA); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr07 | - | View |
ST12G005280 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--* CYCLD_ANTML); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr12 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0007G09710 | No description available. | scaffold_7 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G39800 | similar to AT1G53230|TCP3 | ch1-2 | - | View |
TP3G13230 | similar to AT3G15030|TCP4 (TCP family transcription factor 4) | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV19G02100 | name=GSVIVG01014236001; | chr19 | + | View |
VV12G02510 | name=GSVIVG01020666001; | chr12 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G01200 | mutant cincinnata | 3 | + | View |