Anchorpoints

Gene id
AL1G48300
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G15820No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G53230Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterochronic regulation of leaf differentiation. 'TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3' (TCP3); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1510 Blast hits to 1508 proteins in 333 species: Archae - 0; Bacteria - 12; Metazoa - 43; Fungi - 12; Plants - 1439; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 31-View
AT3G15030TCP family transcription factor 4 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. TCP family transcription factor 4 (TCP4); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1); Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 13; Plants - 1470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G01450No description available.A08+View
BR05G28010No description available.A05-View
BR03G34240No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G11370No description available.Chr7-View
CL11G11590No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00081G00450No description available.CM3.5_scaffold00081-View
CM00027G00340No description available.CM3.5_scaffold00027-View
CM00001G07540No description available.CM3.5_scaffold00001-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00131G00690No description available.supercontig_131+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G13950No description available.scaffold_3+View
CRU_001G40470No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G09770No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G20160No description available.Gm12+View
GM13G34690No description available.Gm13+View
GM12G35720No description available.Gm12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G37300No description available.Chr09+View
GR02G06450No description available.Chr02+View
GR13G17280No description available.Chr13-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G023410No description available.11-View
MD10G005340No description available.10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03741G00660No description available.scaffold03741+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G078200TCP family transcription factorchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G16380No description available.scaffold_4+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G062680Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--* CYCLD_ANTML)%3B contains Interpro domain(s) IPR017887 Transcription factor TCP subgroupch07+View
SL12G014140Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch12-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G024550Transcription factor (Fragment) (AHRD V1 *--* D6MK40_9ASPA); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr07-View
ST12G005280Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--* CYCLD_ANTML); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G09710No description available.scaffold_7-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39800similar to AT1G53230|TCP3ch1-2-View
TP3G13230similar to AT3G15030|TCP4 (TCP family transcription factor 4)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G02100name=GSVIVG01014236001;chr19+View
VV12G02510name=GSVIVG01020666001;chr12+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G01200mutant cincinnata3+View


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Gene id
Species
Description
Chromosome
Strand