Anchorpoints

Gene id
AL1G48220
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G16020No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G53170encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene response factor 8 ethylene response factor 8 (ERF8); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5970 Blast hits to 5718 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5959; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).1-View
AT3G15210ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ethylene responsive element binding factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G34330No description available.A03+View
BR06G01270No description available.A06+View
BR05G27870No description available.A05-View
BR08G01500No description available.A08+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G11780No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G07400No description available.CM3.5_scaffold00001+View
CM00081G00180No description available.CM3.5_scaffold00081-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G14140No description available.scaffold_3+View
CRU_001G40400No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G09400No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G31995No description available.Gm07-View
GM12G35550No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G16950No description available.Chr13+View
GR09G37570No description available.Chr09+View
GR02G06760No description available.Chr02+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G005070No description available.chr3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G39720No description available.Chr01-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G13420similar to AT3G15210|ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)ch3-1+View
TP1G39740similar to AT1G53170|ERF8ch1-2-View


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Gene id
Species
Description
Chromosome
Strand