Anchorpoints

Gene id
AL1G45790
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G28320No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G57800basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 1234 Blast hits to 1224 proteins in 46 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 4; Plants - 1221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein3-View
AT1G51140basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). Encodes a basic helix?loop?helix-type transcription factor involved in photoperiodism flowering. basic helix-loop-helix (bHLH) DNA-binding superfamily protein1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G02530No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G12510No description available.Bvchr4.sca001-View
BV3G15850No description available.Bvchr3.sca009-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G13020No description available.Chr3+View
CL09G03930No description available.Chr9+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00084G00890No description available.supercontig_84+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G38140No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G07020No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G13960No description available.Gm11-View
GM15G03740No description available.Gm15-View
GM13G41670No description available.Gm13+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10963G00630No description available.scaffold10963+View
ME04681G00240No description available.scaffold04681-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G098310transcription factor bHLH122-like proteinchr2+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G31300helix-loop-helix DNA-binding domain containing protein, expressed9+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G20720No description available.Chr03+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30169G01730No description available.30169-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G056650BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE)%3B contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLHch11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G40910No description available.scaffold_1+View
TC0005G16690No description available.scaffold_5-View
TC0009G22350No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G37890similar to AT1G51140|basic helix-loop-helix (bHLH) family proteinch1-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G06410name=GSVIVG01025313001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G32480DNA binding protein1+View
ZM07G17850helix-loop-helix DNA-binding domain containing protein7+View


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Gene id
Species
Description
Chromosome
Strand