Anchorpoints
- Gene id
- AL1G39570
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G44830 | Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G21910.1); Has 5711 Blast hits to 5172 proteins in 243 species: Archae - 0; Bacteria - 8; Metazoa - 212; Fungi - 26; Plants - 5113; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Overexpression in cultured cells results in an increase in pectin deposition. | 1 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G05520 | No description available. | Chr8 | - | View |
CL11G09750 | No description available. | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00013G01030 | No description available. | CM3.5_scaffold00013 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G33590 | No description available. | scaffold_1 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G32230 | No description available. | scaffold_6 | - | View |
EG0006G37380 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G29040 | Ethylene-responsive transcription factor ERF012 (probable) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G43040 | No description available. | Gm04 | + | View |
GM06G11700 | No description available. | Gm06 | - | View |
GM13G02860 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G22090 | No description available. | Chr02 | - | View |
GR09G24450 | No description available. | Chr09 | - | View |
GR10G04890 | No description available. | Chr10 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07238G00060 | No description available. | scaffold07238 | - | View |
ME06853G00200 | No description available. | scaffold06853 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G072610 | AP2 domain class transcription factor | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G50580 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G17600 | No description available. | Chr05 | - | View |
PT02G08560 | No description available. | Chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G11820 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G33690 | similar to AT1G44830|AP2 domain-containing transcription factor TINY, putative | ch1-2 | + | View |