Anchorpoints

Gene id
AL1G39570
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G44830Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G21910.1); Has 5711 Blast hits to 5172 proteins in 243 species: Archae - 0; Bacteria - 8; Metazoa - 212; Fungi - 26; Plants - 5113; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Overexpression in cultured cells results in an increase in pectin deposition.1+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G05520No description available.Chr8-View
CL11G09750No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00013G01030No description available.CM3.5_scaffold00013-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G33590No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G32230No description available.scaffold_6-View
EG0006G37380No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G29040Ethylene-responsive transcription factor ERF012 (probable)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G43040No description available.Gm04+View
GM06G11700No description available.Gm06-View
GM13G02860No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G22090No description available.Chr02-View
GR09G24450No description available.Chr09-View
GR10G04890No description available.Chr10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07238G00060No description available.scaffold07238-View
ME06853G00200No description available.scaffold06853+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G072610AP2 domain class transcription factorchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G50580No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G17600No description available.Chr05-View
PT02G08560No description available.Chr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G11820No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G33690similar to AT1G44830|AP2 domain-containing transcription factor TINY, putativech1-2+View


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Gene id
Species
Description
Chromosome
Strand