Anchorpoints
- Gene id
- AL1G33920
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G35230 | Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system. VQ motif-containing protein IKU1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of seed growth, endosperm development; LOCATED IN: polar nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G32610.2); Has 32531 Blast hits to 21168 proteins in 1133 species: Archae - 22; Bacteria - 2536; Metazoa - 15453; Fungi - 6059; Plants - 4197; Viruses - 550; Other Eukaryotes - 3714 (source: NCBI BLink). | 2 | + | View |
AT1G32610 | hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 506 Blast hits to 500 proteins in 131 species: Archae - 0; Bacteria - 7; Metazoa - 178; Fungi - 141; Plants - 111; Viruses - 9; Other Eukaryotes - 60 (source: NCBI BLink). hydroxyproline-rich glycoprotein family protein | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G09440 | No description available. | A05 | - | View |
BR04G20890 | No description available. | A04 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G04590 | No description available. | Bvchr5.sca007 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G11570 | No description available. | Chr9 | + | View |
CL10G00500 | No description available. | Chr10 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM01596G01220 | No description available. | CM3.5_scaffold01596 | - | View |
CM00021G01600 | No description available. | CM3.5_scaffold00021 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G16350 | No description available. | scaffold_4 | + | View |
CRU_008G01140 | No description available. | scaffold_8 | - | View |
CRU_001G29570 | No description available. | scaffold_1 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G18070 | No description available. | scaffold_4 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR04G18540 | No description available. | Chr04 | - | View |
GR03G18180 | No description available. | Chr03 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G14240 | No description available. | Chr01 | + | View |
PT03G09180 | No description available. | Chr03 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G061190 | Hydroxyproline-rich glycoprotein family protein (AHRD V1 *-*- D7KHM1_ARALY)%3B contains Interpro domain(s) IPR008889 VQ | ch06 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G021360 | No description available. | chr06 | - | View |
ST08G021310 | Hydroxyproline-rich glycoprotein family protein (AHRD V1 ***- D7KHM1_ARALY); contains Interpro domain(s) IPR008889 VQ | chr08 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G22670 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G17450 | similar to AT2G35230|VQ motif-containing protein | ch4-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G02290 | name=GSVIVG01013160001; | chr2 | - | View |