PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AL1G29250
Organism: Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AL4G18770	No description available.	scaffold_4	-	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G33530	serine carboxypeptidase-like 46 (scpl46); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 45 (TAIR:AT1G28110.2); Has 3657 Blast hits to 3595 proteins in 428 species: Archae - 0; Bacteria - 306; Metazoa - 635; Fungi - 851; Plants - 1456; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). serine carboxypeptidase-like 46	2	-	View
AT1G28110	serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 3718 Blast hits to 3657 proteins in 439 species: Archae - 0; Bacteria - 354; Metazoa - 639; Fungi - 854; Plants - 1450; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). serine carboxypeptidase-like 45	1	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR08G22010	No description available.	A08	+	View
BR09G18110	No description available.	A09	+	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV6G10650	No description available.	Bvchr6.sca027	-	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL07G14200	No description available.	Chr7	-	View

Cucumis melo

Gene id	Description	Chromosome	Strand	Multiplicon
CM00031G02800	No description available.	CM3.5_scaffold00031	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00142G00470	No description available.	supercontig_142	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_001G25480	No description available.	scaffold_1	-	View
CRU_004G14660	No description available.	scaffold_4	-	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME02264G00220	No description available.	scaffold02264	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT03G16400	No description available.	Chr03	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP1G24300	similar to AT1G28110\|SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)	ch1-1	-	View