Anchorpoints

Gene id
AL1G21020
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G24660No description available.scaffold_2-View
AL4G00300No description available.scaffold_4+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G21190ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 178; Plants - 231; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). ER lumen protein retaining receptor family protein2+View
AT1G19970ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G75760.1); Has 893 Blast hits to 892 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 180; Plants - 232; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). ER lumen protein retaining receptor family protein1-View
AT4G38790ER lumen protein retaining receptor family protein ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT2G21190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View
AT1G75760ER lumen protein retaining receptor family protein ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G19970.1); Has 891 Blast hits to 891 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 179; Plants - 231; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G20250No description available.A08-View
BR08G25310No description available.A08+View
BR09G44780No description available.A09-View
BR07G30990No description available.A07-View
BR07G10710No description available.A07+View
BR06G14430No description available.A06-View
BR07G19830No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G10600No description available.Bvchr8.sca001-View
BV0G61870No description available.Bvchr1_un.sca001-View
BV9G02900No description available.Bvchr9.sca025+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G19350No description available.Chr5+View
CL08G14090No description available.Chr8+View
CL02G11750No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G03730No description available.CM3.5_scaffold00014-View
CM01596G04710No description available.CM3.5_scaffold01596+View
CM00045G00580No description available.CM3.5_scaffold00045-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G00420No description available.supercontig_26-View
CP00037G01940No description available.supercontig_37+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G18680No description available.scaffold_1-View
CRU_002G21320No description available.scaffold_2-View
CRU_007G00620No description available.scaffold_7+View
CRU_004G00220No description available.scaffold_4+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G05520No description available.scaffold00002-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G11090No description available.scaffold_9-View
EG0006G13490No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G38590Putative ER lumen protein retaining receptor C28H8.4 (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G02651No description available.Gm04+View
GM06G02680No description available.Gm06+View
GM04G00760No description available.Gm04+View
GM06G00781No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G03340No description available.Chr08-View
GR02G19260No description available.Chr02+View
GR10G00430No description available.Chr10+View
GR05G25200No description available.Chr05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G019870No description available.5-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07012G00520No description available.scaffold07012+View
ME02943G00250No description available.scaffold02943-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G113920ER lumen protein retaining receptor-like proteinchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G17740No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G16740No description available.Chr04-View
PT02G02230No description available.Chr02+View
PT09G12890No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G05410No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G054850ER lumen protein retaining receptor family protein (AHRD V1 ***- D7LL09_ARALY)%3B contains Interpro domain(s) IPR000133 ER lumen protein retaining receptorch10-View
SL01G111090ER lumen protein retaining receptor family protein (AHRD V1 ***- D7LL09_ARALY)%3B contains Interpro domain(s) IPR000133 ER lumen protein retaining receptorch01-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G048500ER lumen protein retaining receptor family protein (AHRD V1 ***- D7LL09_ARALY); contains Interpro domain(s) IPR000133 ER lumen protein retaining receptorchr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G06480No description available.scaffold_2+View
TC0008G04270No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G37030similar to AT4G38790|ER lumen protein retaining receptor family proteinch7-6-View
TP1G17760similar to AT1G19970|ER lumen protein retaining receptor family proteinch1-1-View
TP4G00350similar to AT2G21190|ER lumen protein retaining receptor family proteinch4-1+View
TP5G30870similar to AT1G75760|ER lumen protein retaining receptor family proteinch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G10560name=GSVIVG01009903001;chr18-View
VV03G05380name=GSVIVG01024106001;chr3-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G34160No description available.2+View


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Gene id
Species
Description
Chromosome
Strand