Anchorpoints
- Gene id
- AL1G20820
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G24340 | No description available. | scaffold_2 | + | View |
AL1G40110 | No description available. | scaffold_1 | + | View |
AL7G13890 | No description available. | scaffold_7 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G28000 | P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G52882.1); Has 39856 Blast hits to 37451 proteins in 3236 species: Archae - 1544; Bacteria - 17865; Metazoa - 4891; Fungi - 3526; Plants - 3328; Viruses - 34; Other Eukaryotes - 8668 (source: NCBI BLink). P-loop containing nucleoside triphosphate hydrolases superfamily protein | 4 | + | View |
AT4G27680 | P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). P-loop containing nucleoside triphosphate hydrolases superfamily protein | 4 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G18020 | No description available. | A01 | + | View |
BR02G23170 | No description available. | A02 | + | View |
BR10G01520 | No description available. | A10 | + | View |
BR08G30530 | No description available. | A08 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G02520 | No description available. | Bvchr3.sca003 | - | View |
BV1G06900 | No description available. | Bvchr1.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G14490 | No description available. | Chr8 | + | View |
CL01G00110 | No description available. | Chr1 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G00590 | No description available. | supercontig_3 | + | View |
CP00095G00700 | No description available. | supercontig_95 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G21040 | No description available. | scaffold_2 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G17720 | No description available. | scaffold_9 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G02780 | No description available. | Gm08 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G27160 | No description available. | Chr09 | + | View |
GR06G18840 | No description available. | Chr06 | - | View |
GR04G02970 | No description available. | Chr04 | + | View |
GR05G10990 | No description available. | Chr05 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03741G00750 | No description available. | scaffold03741 | - | View |
ME06089G00200 | No description available. | scaffold06089 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G05730 | cell division control protein 48 homolog E, putative, expressed | 3 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G10870 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G12050 | No description available. | Chr09 | + | View |
PT01G08980 | No description available. | Chr01 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G007330 | Cell division protease ftsH homolog (AHRD V1 *-*- FTSH_RICTY)%3B contains Interpro domain(s) IPR005936 Peptidase M41%2C FtsH | ch03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G03240 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G25940 | similar to AT4G28000|ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | ch7-5 | + | View |
TP5G30570 | similar to AT1G45000|26S proteasome regulatory complex subunit p42D, putative | ch5-7 | + | View |
TP7G21910 | similar to AT4G23940|FtsH protease, putative | ch7-4 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G03880 | No description available. | 1 | - | View |
ZM05G15630 | ATPase family AAA domain-containing protein 1 | 5 | + | View |
ZM09G28530 | No description available. | 9 | - | View |