Anchorpoints
- Gene id
- AL1G19110
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G18210 | Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G73630.1); Has 26408 Blast hits to 16156 proteins in 1551 species: Archae - 2; Bacteria - 177; Metazoa - 9876; Fungi - 6429; Plants - 6014; Viruses - 0; Other Eukaryotes - 3910 (source: NCBI BLink). | 1 | - | View |
AT1G73630 | EF hand calcium-binding protein family EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 22917 Blast hits to 14772 proteins in 1512 species: Archae - 2; Bacteria - 123; Metazoa - 7738; Fungi - 5792; Plants - 5797; Viruses - 0; Other Eukaryotes - 3465 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G26120 | No description available. | A08 | + | View |
BR06G12920 | No description available. | A06 | - | View |
BR07G07750 | No description available. | A07 | - | View |
BR09G46120 | No description available. | A09 | - | View |
BR07G29390 | No description available. | A07 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G14930 | No description available. | Chr6 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G02740 | No description available. | CM3.5_scaffold00005 | + | View |
CM00030G02850 | No description available. | CM3.5_scaffold00030 | - | View |
CM00008G01460 | No description available. | CM3.5_scaffold00008 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G04020 | No description available. | supercontig_3 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G17070 | No description available. | scaffold_1 | - | View |
CRU_002G19220 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00039G00070 | No description available. | scaffold00039 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G07780 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G16140 | Calmodulin-2 (CaM-2) | LG5 | + | View |
FV5G16780 | Probable calcium-binding protein CML27 (putative) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G05810 | No description available. | Gm08 | - | View |
GM05G33880 | No description available. | Gm05 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G28960 | No description available. | Chr08 | - | View |
GR05G01690 | No description available. | Chr05 | - | View |
GR07G00400 | No description available. | Chr07 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G051180 | No description available. | chr4 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02572G00080 | No description available. | scaffold02572 | - | View |
ME06631G00320 | No description available. | scaffold06631 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G107110 | EF hand calcium-binding family protein | chr8 | - | View |
MT6G079570 | EF hand calcium-binding family protein | chr6 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G10710 | No description available. | scaffold_4 | - | View |
PPE_005G23330 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT12G04820 | No description available. | Chr12 | + | View |
PT04G08920 | No description available. | Chr04 | - | View |
PT15G03950 | No description available. | Chr15 | + | View |
PT17G12620 | No description available. | Chr17 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G118810 | Calmodulin (AHRD V1 ***- D8TKN5_VOLCA)%3B contains Interpro domain(s) IPR003299 Flagellar calcium-binding protein (calflagin) | ch03 | + | View |
SL06G068960 | Calmodulin (AHRD V1 ***- D3PJ43_9MAXI)%3B contains Interpro domain(s) IPR011992 EF-Hand type | ch06 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G032300 | Calmodulin (AHRD V1 ***- B6U186_MAIZE); contains Interpro domain(s) IPR011992 EF-Hand type | chr03 | + | View |
ST06G025960 | Calmodulin (AHRD V1 ***- D3PJ43_9MAXI); contains Interpro domain(s) IPR011992 EF-Hand type | chr06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G05350 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G16200 | similar to AT1G18210|calcium-binding protein, putative | ch1-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G07080 | name=GSVIVG01008421001; | chr17 | + | View |