Anchorpoints

Gene id
AL1G19110
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G22470No description available.scaffold_2+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18210Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G73630.1); Has 26408 Blast hits to 16156 proteins in 1551 species: Archae - 2; Bacteria - 177; Metazoa - 9876; Fungi - 6429; Plants - 6014; Viruses - 0; Other Eukaryotes - 3910 (source: NCBI BLink).1-View
AT1G73630EF hand calcium-binding protein family EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 22917 Blast hits to 14772 proteins in 1512 species: Archae - 2; Bacteria - 123; Metazoa - 7738; Fungi - 5792; Plants - 5797; Viruses - 0; Other Eukaryotes - 3465 (source: NCBI BLink).1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G26120No description available.A08+View
BR06G12920No description available.A06-View
BR07G07750No description available.A07-View
BR09G46120No description available.A09-View
BR07G29390No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G14930No description available.Chr6+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G02740No description available.CM3.5_scaffold00005+View
CM00030G02850No description available.CM3.5_scaffold00030-View
CM00008G01460No description available.CM3.5_scaffold00008+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G04020No description available.supercontig_3+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G17070No description available.scaffold_1-View
CRU_002G19220No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00039G00070No description available.scaffold00039-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G07780No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G16140Calmodulin-2 (CaM-2)LG5+View
FV5G16780Probable calcium-binding protein CML27 (putative)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G05810No description available.Gm08-View
GM05G33880No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G28960No description available.Chr08-View
GR05G01690No description available.Chr05-View
GR07G00400No description available.Chr07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G051180No description available.chr4-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02572G00080No description available.scaffold02572-View
ME06631G00320No description available.scaffold06631-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G107110EF hand calcium-binding family proteinchr8-View
MT6G079570EF hand calcium-binding family proteinchr6-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G10710No description available.scaffold_4-View
PPE_005G23330No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G04820No description available.Chr12+View
PT04G08920No description available.Chr04-View
PT15G03950No description available.Chr15+View
PT17G12620No description available.Chr17-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G118810Calmodulin (AHRD V1 ***- D8TKN5_VOLCA)%3B contains Interpro domain(s) IPR003299 Flagellar calcium-binding protein (calflagin)ch03+View
SL06G068960Calmodulin (AHRD V1 ***- D3PJ43_9MAXI)%3B contains Interpro domain(s) IPR011992 EF-Hand typech06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G032300Calmodulin (AHRD V1 ***- B6U186_MAIZE); contains Interpro domain(s) IPR011992 EF-Hand typechr03+View
ST06G025960Calmodulin (AHRD V1 ***- D3PJ43_9MAXI); contains Interpro domain(s) IPR011992 EF-Hand typechr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G05350No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G16200similar to AT1G18210|calcium-binding protein, putativech1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G07080name=GSVIVG01008421001;chr17+View


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Gene id
Species
Description
Chromosome
Strand