Anchorpoints
- Gene id
- AL1G13520
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G12890 | encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18560.1); Has 5243 Blast hits to 5226 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5234; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | 1 | + | View |
AT1G68550 | encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 4835 Blast hits to 4832 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 3; Plants - 4809; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G49350 | No description available. | A09 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00033G00300 | No description available. | supercontig_33 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G12050 | No description available. | scaffold_1 | + | View |
CRU_002G14170 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G01890 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G19360 | No description available. | scaffold_4 | + | View |
EG0009G13040 | No description available. | scaffold_9 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G10220 | Ethylene-responsive transcription factor ESR2 (Protein DRN-LIKE) (probable) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM16G05070 | No description available. | Gm16 | - | View |
GM02G07310 | No description available. | Gm02 | + | View |
GM19G27790 | No description available. | Gm19 | + | View |
GM16G26320 | No description available. | Gm16 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G17790 | No description available. | Chr05 | - | View |
GR08G16100 | No description available. | Chr08 | + | View |
GR02G18750 | No description available. | Chr02 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G005800 | No description available. | 16 | - | View |
MD04G005620 | No description available. | 4 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04175G00280 | No description available. | scaffold04175 | + | View |
ME06137G00160 | No description available. | scaffold06137 | - | View |
ME05432G00300 | No description available. | scaffold05432 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G084370 | AP2 domain class transcription factor | chr7 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS04G32620 | ethylene-responsive transcription factor ERF114, putative, expressed | 4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G22070 | No description available. | scaffold_1 | - | View |
PPE_002G17670 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G16100 | No description available. | Chr03 | - | View |
PT14G09450 | No description available. | Chr14 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30131G00910 | No description available. | 30131 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G081960 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- ERF4_NICSY)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch08 | + | View |
SL05G013540 | Ethylene-responsive transcription factor ERF086 (AHRD V1 *-*- D7LXW6_ARALY)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch05 | + | View |
SL12G005960 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch12 | - | View |
SL01G095500 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6T615_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G032950 | Ethylene responsive transcription factor 2a (AHRD V1 *-*- C0J9I7_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr01 | + | View |
ST05G014440 | Ethylene-responsive transcription factor ERF086 (AHRD V1 *-*- D7LXW6_ARALY); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr05 | + | View |
ST11G017530 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6SU49_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr11 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G26110 | No description available. | scaffold_2 | + | View |
TC0004G04770 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G11460 | similar to AT1G12890|AP2 domain-containing transcription factor, putative | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G13470 | name=GSVIVG01032961001; | chr14 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM02G16760 | AP2 domain containing protein | 2 | - | View |