Anchorpoints

Gene id
AL1G12970
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G02310No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G12610DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.1-View
AT1G63030Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in the reduction of gibberellic acid biosynthesis. This gene is expressed in all tissues examined, but most abundantly expressed in rosette leaves and stems. Overexpression of DDF1, a putative paralog of this gene, also reduces gibberellic acid biosynthesis and makes the plants more tolerant to high-salinity levels. DWARF AND DELAYED FLOWERING 2 (ddf2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12610.1); Has 5240 Blast hits to 5238 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5235; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00069G01040No description available.scaffold00069+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G08380No description available.A06+View
BR02G16570No description available.A02+View
BR08G28090No description available.A08-View
BR09G49560No description available.A09+View
BR09G13070No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G08030No description available.Bvchr5.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G02910No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G06020No description available.CM3.5_scaffold00005-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G11670No description available.scaffold_1-View
CRU_002G01840No description available.scaffold_2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G42500No description available.Gm01-View
GM05G03540No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G28060No description available.Chr08+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G102660dehydration-responsive element-binding proteinchr4-View
MT5G010910dehydration-responsive element-binding proteinchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS10G38000dehydration-responsive element-binding protein, putative, expressed10+View
OS04G48350Dehydration-responsive element-binding protein 1E dehydration-responsive element-binding protein, putative, expressed4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G09820No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G12120No description available.Chr03-View
PT01G11050No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G00680No description available.30147+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G007820Ethylene-responsive transcription factor 10 (AHRD V1 *-** ERF77_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G005850Ethylene-responsive transcription factor 10 (AHRD V1 *-** ERF77_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G17120No description available.scaffold_3-View
TC0003G26740No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G11200similar to AT1G12610|DDF1 (DWARF AND DELAYED FLOWERING 1)ch1-1-View
TP2G01530similar to AT1G12630|DNA binding / transcription activator/ transcription factorch2-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G07270name=GSVIVG01019860001;chr2+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G06890dehydration-responsive element-binding protein 1D2-View


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Gene id
Species
Description
Chromosome
Strand