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WorkbenchAnchorpoints
- Gene id
- AL1G11130
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G10970 | A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency. zinc transporter 4 precursor (ZIP4); CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 3 (TAIR:AT1G60960.1); Has 2241 Blast hits to 2085 proteins in 351 species: Archae - 0; Bacteria - 278; Metazoa - 580; Fungi - 588; Plants - 521; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). zinc transporter 4 precursor | 1 | - | View |
| AT1G60960 | iron regulated transporter 3 (IRT3); FUNCTIONS IN: cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: cation transport, zinc ion transport, response to nematode, iron ion transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 4 precursor (TAIR:AT1G10970.1); Has 3842 Blast hits to 3068 proteins in 499 species: Archae - 2; Bacteria - 683; Metazoa - 1421; Fungi - 659; Plants - 616; Viruses - 7; Other Eukaryotes - 454 (source: NCBI BLink). Encodes a plasma membrane localized zinc/iron transporter. iron regulated transporter 3 | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G50490 | No description available. | A09 | - | View |
| BR01G25660 | No description available. | A01 | - | View |
| BR09G14230 | No description available. | A09 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G10010 | No description available. | scaffold_1 | - | View |
| CRU_002G04100 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G03620 | similar to AT1G60960|IRT3 | ch2-2 | + | View |
| TP1G09690 | similar to AT1G10970|ZIP4 (ZINC TRANSPORTER 4 PRECURSOR) | ch1-1 | - | View |