Anchorpoints

Gene id
AL1G05400
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G16430No description available.scaffold_4-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G05880ARIADNE 12 (ARI12); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1). RING/U-box superfamily protein Encodes ARI12 (ARIADNE 12). ARI12 belongs to a family of ?RING between RING fingers' (RBR) domain proteins with E3 ligase activity. Expression of ARI12 is induced by UV-B exposure.1+View
AT2G31510ARIADNE 7 (ARI7); FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G05890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). IBR domain-containing protein2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G18640No description available.A04+View
BR10G01880No description available.A10-View
BR03G15780No description available.A03-View
BR05G12270No description available.A05-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G04830No description available.Bvchr3.sca003+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00015G01460No description available.CM3.5_scaffold00015+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00071G00100No description available.supercontig_71-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G04920No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G02020No description available.scaffold_1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G41830No description available.Gm13+View
GM12G05740No description available.Gm12-View
GM11G13750No description available.Gm11-View
GM12G03030No description available.Gm12-View
GM15G03590No description available.Gm15-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G22740No description available.Chr06-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G098580E3 ubiquitin-protein ligase ARI7 C putativechr2+View
MT4G066650E3 ubiquitin-protein ligase ARI7 C putativechr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G41470expressed protein4+View
OS09G33876No description available.9+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G03200No description available.Chr17-View
PT07G12690No description available.Chr07+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G073340Ariadne-like ubiquitin ligase (AHRD V1 **-* D3AZ84_POLPA)%3B contains Interpro domain(s) IPR002867 Zinc finger%2C C6HC-typech06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G027640Ariadne-like ubiquitin ligase (AHRD V1 **-* D3AZ84_POLPA); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-typechr06-View
ST11G010120Ariadne-like ubiquitin ligase (AHRD V1 **-* D3AZ84_POLPA); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-typechr11+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G04710similar to AT1G05880|nucleic acid binding / protein binding / structural molecule/ zinc ion bindingch1-1+View
TP4G13970similar to AT2G31510|IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G00450name=GSVIVG01010742001;chr5+View


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Gene id
Species
Description
Chromosome
Strand