Anchorpoints
- Gene id
- AL1G03690
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G06680 | No description available. | scaffold_8 | + | View |
AL4G16110 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G04370 | Ethylene-responsive element binding factor 14 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink). | 1 | + | View |
AT5G43410 | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Ethylene-responsive element binding factor 14 (TAIR:AT1G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
AT3G23220 | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G23230.1); Has 5797 Blast hits to 5590 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5785; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein | 3 | + | View |
AT2G31230 | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive element binding factor 15 ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). | 2 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00002G04840 | No description available. | scaffold00002 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G03400 | No description available. | A10 | - | View |
BR04G18500 | No description available. | A04 | - | View |
BR05G10660 | No description available. | A05 | + | View |
BR07G05350 | No description available. | A07 | + | View |
BR09G20180 | No description available. | A09 | + | View |
BR09G53540 | No description available. | A09 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G09630 | No description available. | Bvchr3.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G07260 | No description available. | Chr9 | + | View |
CL06G06710 | No description available. | Chr6 | + | View |
CL05G04690 | No description available. | Chr5 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00026G00550 | No description available. | CM3.5_scaffold00026 | - | View |
CM00018G01190 | No description available. | CM3.5_scaffold00018 | - | View |
CM00006G05310 | No description available. | CM3.5_scaffold00006 | - | View |
CM00057G00140 | No description available. | CM3.5_scaffold00057 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00044G00660 | No description available. | supercontig_44 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G03260 | No description available. | scaffold_1 | + | View |
CRU_003G22480 | No description available. | scaffold_3 | + | View |
CRU_008G05090 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00022G00010 | No description available. | scaffold00022 | - | View |
CS00088G00430 | No description available. | scaffold00088 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G25010 | No description available. | scaffold_8 | - | View |
EG0011G27530 | No description available. | scaffold_11 | - | View |
EG0008G01580 | No description available. | scaffold_8 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G00120 | Ethylene-responsive transcription factor 14 (AtERF14) (similar to) | LG4 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G33060 | No description available. | Gm10 | - | View |
GM10G04160 | No description available. | Gm10 | + | View |
GM10G00980 | No description available. | Gm10 | - | View |
GM13G18330 | No description available. | Gm13 | + | View |
GM19G34650 | No description available. | Gm19 | + | View |
GM20G34550 | No description available. | Gm20 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G04920 | No description available. | Chr05 | + | View |
GR01G25240 | No description available. | Chr01 | + | View |
GR11G17280 | No description available. | Chr11 | + | View |
GR06G24980 | No description available. | Chr06 | + | View |
GR04G22080 | No description available. | Chr04 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G061510 | No description available. | chr1 | - | View |
LJ6G000390 | No description available. | chr6 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G022970 | No description available. | 13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09880G00210 | No description available. | scaffold09880 | + | View |
ME03802G00350 | No description available. | scaffold03802 | - | View |
ME10563G01120 | No description available. | scaffold10563 | + | View |
ME01551G01060 | No description available. | scaffold01551 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G043350 | ethylene-responsive transcription factor 1B | chr1 | - | View |
MT1G074230 | AP2 domain class transcription factor | chr1 | + | View |
MT1G069940 | ethylene-responsive transcription factor 1B | chr1 | - | View |
MT1G079630 | AP2 domain class transcription factor | chr1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G03690 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G07230 | No description available. | Chr10 | - | View |
PT08G16600 | No description available. | Chr08 | + | View |
PT12G03290 | No description available. | Chr12 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29603G00010 | No description available. | 29603 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G089910 | Ethylene responsive transcription factor 1a (AHRD V1 *-*- C0J9I9_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch09 | + | View |
SL03G005500 | Ethylene-responsive transcription factor 14 (AHRD V1 **** ERF97_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch03 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G026020 | Ethylene-responsive transcription factor 1A (AHRD V1 *-** A9P6A4_MEDTR); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr09 | - | View |
ST03G005730 | Ethylene responsive transcription factor 2a (AHRD V1 *-** C0J9I7_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G25590 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G08290 | similar to AT5G43410|ethylene-responsive factor, putative | ch2-4 | - | View |
TP3G20870 | similar to AT3G23220|DNA binding / transcription factor | ch3-1 | + | View |
TP1G03180 | similar to AT1G04370|ATERF14 (Ethylene-responsive element binding factor 14) | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G10790 | name=GSVIVG01028312001; | chr7 | + | View |
VV05G07910 | name=GSVIVG01027770001; | chr5 | + | View |