Anchorpoints

Gene id
AL1G03120
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G05710No description available.scaffold_8-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G03800encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-10). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ERF domain protein 10 ERF domain protein 10 (ERF10); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: erf domain protein 9 (TAIR:AT5G44210.1); Has 6303 Blast hits to 5828 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6292; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).1-View
AT5G44210erf domain protein 9 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink).5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR00G07210No description available.Scaffold000111+View
BR07G06880No description available.A07+View
BR08G21780No description available.A08+View
BR05G16930No description available.A05+View
BR10G03840No description available.A10+View
BR09G17850No description available.A09+View
BR01G33630No description available.A01-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G00960No description available.Chr7-View
CL03G07750No description available.Chr3+View
CL06G06710No description available.Chr6+View
CL07G02030No description available.Chr7-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00018G01190No description available.CM3.5_scaffold00018-View
CM00001G07400No description available.CM3.5_scaffold00001+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00083G00790No description available.supercontig_83+View
CP00027G00150No description available.supercontig_27+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G03260No description available.scaffold_1+View
CRU_008G04220No description available.scaffold_8-View
CRU_001G02710No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G09400No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G21350Ethylene-responsive transcription factor ERF053 (probable)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G04160No description available.Gm10+View
GM10G00980No description available.Gm10-View
GM12G13315No description available.Gm12-View
GM15G08360No description available.Gm15+View
GM13G18330No description available.Gm13+View
GM12G26836No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G15590No description available.Chr10-View
GR10G25660No description available.Chr10-View
GR12G12570No description available.Chr12+View
GR07G14570No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G026570No description available.chr6+View
LJ5G020390No description available.chr5+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04851G00330No description available.scaffold04851+View
ME02307G00320No description available.scaffold02307+View
ME03802G00350No description available.scaffold03802-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G078710ethylene response factorchr4-View
MT2G014300ethylene response factorchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G04840No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G04750No description available.Chr04+View
PT07G13810No description available.Chr07+View
PT11G05690No description available.Chr11+View
PT17G01370No description available.Chr17-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G00240No description available.30190+View
RC29983G00450No description available.29983+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G077810Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6SU49_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch02+View
SL07G053740Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch07+View
SL09G089910Ethylene responsive transcription factor 1a (AHRD V1 *-*- C0J9I9_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G009310Ethylene-responsive transcription factor 4 (AHRD V1 **** B6SIZ8_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr10-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G17840No description available.scaffold_6+View
TC0002G17870No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G09030similar to AT5G44210|ERF9 (ERF DOMAIN PROTEIN 9)ch2-4+View
TP1G39740similar to AT1G53170|ERF8ch1-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G01860name=GSVIVG01020584001;chr12+View
VV12G11490name=GSVIVG01030515001;chr12+View
VV10G01290name=GSVIVG01021098001;chr10-View


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Gene id
Species
Description
Chromosome
Strand