Integrative Orthology Viewer: ZM01G53260 (Zea mays)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Zea mays | Orthologous gene family | ZM01G46150 ZM01G53260 ZM05G03990 | 3 | |
Anchor point | ZM05G03990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ZM01G53260 ZM05G03990 | 2 | ||
Tree-based ortholog | ZM01G53260 ZM05G03990 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00110G00380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00110G00380 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00110G00380 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G27060 AL3G01110 AL5G09060 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G01110 | 1 | ||
Tree-based ortholog | many-to-many | AL1G27060 AL3G01110 AL6G15310 ... | 5 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G26570 AT3G29360 AT5G15490 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G29360 | 1 | ||
Tree-based ortholog | many-to-many | AT1G26570 AT5G15490 AT3G29360 ... | 4 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G00050 BV7G02050 BV9G04660 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G04660 | 1 | ||
Tree-based ortholog | many-to-many | BV7G02050 BV9G04660 BV5G00050 | 3 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G00450 BR02G07470 BR03G06420 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G19610 | 1 | ||
Tree-based ortholog | many-to-many | BR09G29890 BR02G07470 BR10G19610 ... | 7 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G23510 CRU_003G01100 CRU_005G07490 ... | 5 | |
Anchor point | 1-to-many | CRU_005G07490 CRU_001G23510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G13320 | 1 | ||
Tree-based ortholog | many-to-many | CRU_001G23510 CRU_003G01100 CRU_006G13320 ... | 5 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00094G00190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00094G00190 | 1 | ||
Tree-based ortholog | many-to-many | CP00001G01050 CP00094G00190 CP00014G01610 | 3 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR07G10530 CR06G07440 | 2 | |
Tree-based ortholog | many-to-many | CR06G07440 CR07G10530 CR12G10820 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G00360 CL06G16350 CL06G16360 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL00G00360 | 1 | ||
Tree-based ortholog | many-to-many | CL08G10020 CL00G00360 CL06G16350 ... | 4 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G05180 CS00015G02400 CS00122G00280 | 3 | |
Anchor point | 1-to-many | CS00122G00280 CS00015G02400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00015G02400 | 1 | ||
Tree-based ortholog | many-to-many | CS00003G05180 CS00015G02400 CS00122G00280 | 3 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00014G08060 CM00027G00090 CM00030G01380 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00027G00090 | 1 | ||
Tree-based ortholog | many-to-many | CM00014G08060 CM00027G00090 CM00030G01380 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G12050 EG0011G20920 | 2 | |
Anchor point | 1-to-1 | EG0011G20920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G12050 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G12050 EG0011G20920 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G04440 FV5G12500 FV7G21840 | 3 | |
Anchor point | 1-to-1 | FV5G12500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G12500 | 1 | ||
Tree-based ortholog | many-to-many | FV7G21840 FV0G04440 FV5G12500 | 3 | ||
Glycine max | Orthologous gene family | many-to-1 | GM14G14161 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM08G26520 GM18G50000 | 2 | ||
Tree-based ortholog | many-to-many | GM02G12870 GM01G06970 GM20G03221 ... | 10 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G07790 GR05G14470 GR07G08180 ... | 6 | |
Anchor point | 1-to-many | GR08G17790 GR13G09260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G08180 | 1 | ||
Tree-based ortholog | many-to-many | GR08G17790 GR13G09260 GR05G14470 ... | 6 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G017610 LJ2G021020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G017610 | 1 | ||
Tree-based ortholog | many-to-many | LJ2G021020 LJ2G017610 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G105260 MD00G205080 MD00G211240 ... | 10 | |
Anchor point | 1-to-1 | MD13G004120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD16G003140 MD13G004120 MD00G471460 | 3 | ||
Tree-based ortholog | many-to-many | MD01G003380 MD00G459090 MD00G471460 ... | 10 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03574G00010 ME06609G00370 ME12794G02660 | 3 | |
Anchor point | 1-to-1 | ME08359G01790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME12794G02660 ME08359G01790 | 2 | ||
Tree-based ortholog | many-to-many | ME03574G00010 ME06609G00370 ME08359G01790 ... | 4 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G082990 MT5G043970 MT7G012950 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G012950 | 1 | ||
Tree-based ortholog | many-to-many | MT5G043970 MT4G082990 MT7G012950 ... | 5 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G31210 OS03G40720 OS03G55070 ... | 5 | |
Anchor point | 1-to-1 | OS03G55070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS03G55070 OS12G25700 OS12G25690 | 3 | ||
Tree-based ortholog | many-to-many | OS12G25690 OS03G55070 OS12G25700 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL21G01370 OL13G01610 | 2 | |
Tree-based ortholog | many-to-many | OL13G01610 OL21G01370 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00049G01340 PP00134G00550 PP00334G00360 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00334G00360 PP00134G00550 PP00049G01340 ... | 4 | ||
Tree-based ortholog | many-to-many | PP00365G00090 PP00134G00550 PP00334G00360 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G11860 PT08G09430 PT10G15980 ... | 4 | |
Anchor point | 1-to-1 | PT10G15980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT17G09200 PT04G11860 | 2 | ||
Tree-based ortholog | many-to-many | PT08G09430 PT10G15980 PT17G09200 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G29580 PPE_003G23690 PPE_005G20670 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G29580 | 1 | ||
Tree-based ortholog | many-to-many | PPE_007G03640 PPE_003G23690 PPE_001G29580 ... | 4 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30174G05220 RC30174G05260 RC30174G05270 | 3 | |
Anchor point | 1-to-1 | RC30174G05220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC30174G05270 RC30174G05260 RC30174G05220 | 3 | ||
Tree-based ortholog | many-to-many | RC30174G05260 RC30174G05270 RC30174G05220 ... | 4 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G067080 SL03G115380 SL06G069550 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G067080 | 1 | ||
Tree-based ortholog | many-to-many | SL02G088690 SL02G067080 SL03G065350 ... | 5 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G012920 ST03G028860 ST06G026510 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G028860 | 1 | ||
Tree-based ortholog | many-to-many | ST02G034190 ST02G012920 ST03G021530 ... | 5 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G22210 TP2G17950 TP3G01120 ... | 5 | |
Anchor point | 1-to-many | TP2G17950 TP1G22210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G17950 | 1 | ||
Tree-based ortholog | many-to-many | TP1G22210 TP3G01120 TP6G28610 ... | 5 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G33270 TC0004G09670 | 2 | |
Anchor point | 1-to-many | TC0003G10080 TC0004G09670 TC0002G33270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G09670 | 1 | ||
Tree-based ortholog | many-to-many | TC0002G33270 TC0004G09670 TC0003G10080 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G10260 VV14G02960 | 2 | |
Anchor point | 1-to-1 | VV01G10260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G02960 | 1 | ||
Tree-based ortholog | many-to-many | VV01G10260 VV14G02960 VV17G02960 | 3 |