Integrative Orthology Viewer: VV06G11880 (Vitis vinifera)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Vitis vinifera | Orthologous gene family | VV03G05370 VV05G11200 VV06G08120 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | VV06G11880 | 1 | ||
Tree-based ortholog | VV06G11880 VV06G11870 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G02070 ATR_00040G01740 ATR_00095G00750 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G00150 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00003G02070 ATR_00040G01740 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G53050 AL6G22160 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G31580 | 1 | ||
Tree-based ortholog | many-to-many | AL3G05800 AL1G53050 AL3G06710 ... | 5 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G56560 AT5G22510 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G09510 | 1 | ||
Tree-based ortholog | many-to-many | AT3G05820 AT1G56560 AT3G06500 ... | 4 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G40670 BV4G09160 BV7G08990 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G03230 | 1 | ||
Tree-based ortholog | many-to-many | BV1G04860 BV4G09160 BV0G40670 ... | 4 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G12400 BR10G13660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G31690 | 1 | ||
Tree-based ortholog | many-to-many | BR01G40580 BR00G12400 BR05G34530 ... | 4 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G21240 CRU_002G06970 CRU_006G19670 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G21240 | 1 | ||
Tree-based ortholog | many-to-many | CRU_003G04980 CRU_002G06970 CRU_003G05730 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00009G00010 CP00066G00250 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00066G00250 | 1 | ||
Tree-based ortholog | many-to-many | CP00048G01820 CP00009G00010 CP00019G00020 | 3 | ||
Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G09490 | 1 | |
Tree-based ortholog | many-to-many | CL02G15110 CL05G07530 CL05G22760 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G01710 CS00004G04650 CS00186G00180 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G04550 | 1 | ||
Tree-based ortholog | many-to-many | CS00002G01720 CS00001G04550 CS00004G04650 ... | 7 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00003G02850 CM00006G08360 CM00016G07020 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00065G00260 | 1 | ||
Tree-based ortholog | many-to-many | CM00003G02850 CM00006G08360 CM00016G07020 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G33600 EG0004G19740 EG0007G21180 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G21280 | 1 | ||
Tree-based ortholog | many-to-many | EG0004G19740 EG0008G26740 EG0002G33600 ... | 5 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G44560 FV3G38260 FV6G02970 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G43440 | 1 | ||
Tree-based ortholog | many-to-many | FV7G27320 FV7G05120 FV6G02970 ... | 5 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G38970 GM05G31920 GM07G36440 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G35890 GM20G31730 | 2 | ||
Tree-based ortholog | many-to-many | GM03G38970 GM19G41500 GM10G28640 ... | 9 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G14550 GR04G23550 GR06G11070 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G28920 | 1 | ||
Tree-based ortholog | many-to-many | GR07G11020 GR04G15120 GR13G13060 ... | 10 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G068840 LJ4G037440 LJ4G043500 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G030720 | 1 | ||
Tree-based ortholog | many-to-many | LJ1G068840 LJ5G026170 LJ4G037440 ... | 4 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G425320 MD00G434620 MD02G024180 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD05G019880 | 1 | ||
Tree-based ortholog | many-to-many | MD01G006910 MD00G318260 MD12G020970 ... | 13 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00708G00180 ME02264G01050 ME03569G00300 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07313G00020 | 1 | ||
Tree-based ortholog | many-to-many | ME03581G00600 ME10305G00540 ME02264G01050 ... | 7 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G084610 MT4G075540 MT4G123030 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G096140 | 1 | ||
Tree-based ortholog | many-to-many | MT7G111890 MT1G084610 MT3G015100 ... | 5 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G22900 OS02G03320 OS02G32730 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G34560 | 1 | ||
Tree-based ortholog | many-to-many | OS01G22900 OS03G20020 OS02G32730 ... | 4 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00015G00250 PP00245G00180 PP00279G00200 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00333G00220 PP00227G00220 PP00032G00790 ... | 4 | ||
Tree-based ortholog | many-to-many | PP00279G00200 PP00015G00250 PP00313G00110 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G18650 PT08G02410 PT08G10150 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G11080 PT19G08200 | 2 | ||
Tree-based ortholog | many-to-many | PT14G18820 PT14G10050 PT02G17360 ... | 9 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G10650 PPE_006G12030 PPE_006G31540 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G17750 | 1 | ||
Tree-based ortholog | many-to-many | PPE_002G18480 PPE_006G23890 PPE_006G31540 ... | 6 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29711G00120 RC29766G00010 RC29791G00210 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29728G00050 | 1 | ||
Tree-based ortholog | many-to-many | RC56962G00040 RC29836G00290 RC56962G00030 ... | 7 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G100810 SL11G007270 SL11G067050 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G020610 | 1 | ||
Tree-based ortholog | many-to-many | SL01G100810 SL01G058020 SL01G058010 ... | 6 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G013030 ST01G038610 ST11G011490 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G015440 | 1 | ||
Tree-based ortholog | many-to-many | ST01G038610 ST01G013030 ST11G024860 ... | 4 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G06210 TP3G05450 TP6G22750 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G20160 | 1 | ||
Tree-based ortholog | many-to-many | TP3G04680 TP2G06210 TP3G05450 ... | 4 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G30700 TC0005G32300 TC0009G28390 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G04280 | 1 | ||
Tree-based ortholog | many-to-many | TC0005G32300 TC0004G30700 TC0009G28390 ... | 4 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G11730 ZM05G18260 ZM08G07720 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G16310 ZM05G30270 | 2 | ||
Tree-based ortholog | many-to-many | ZM03G11730 ZM08G07720 ZM01G13740 ... | 4 |