Integrative Orthology Viewer: VV02G04580 (Vitis vinifera)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Vitis vinifera | Orthologous gene family | VV02G04580 | 1 | |
Anchor point | VV16G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | VV02G04580 | 1 | ||
Tree-based ortholog | VV16G00040 VV16G10260 VV00G14220 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00101G00920 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00101G00920 | 1 | ||
Arabidopsis lyrata | Anchor point | 1-to-many | AL4G34610 AL8G17700 AL5G32610 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G32610 | 1 | ||
Tree-based ortholog | many-to-1 | AL8G17700 | 1 | ||
Arabidopsis thaliana | Anchor point | 1-to-many | AT2G46493 AT5G53110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G53110 | 1 | ||
Tree-based ortholog | many-to-many | AT2G46160 AT5G07040 AT2G46493 ... | 9 | ||
Beta vulgaris | Anchor point | 1-to-many | BV5G05990 BV3G02310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05990 | 1 | ||
Tree-based ortholog | many-to-many | BV3G02310 BV5G05990 | 2 | ||
Brassica rapa | Anchor point | 1-to-1 | BR10G07060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G16020 | 1 | ||
Tree-based ortholog | many-to-many | BR04G27550 BR03G17730 BR04G21380 ... | 11 | ||
Capsella rubella | Anchor point | 1-to-1 | CRU_004G28120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G13010 | 1 | ||
Tree-based ortholog | many-to-many | CRU_005G26830 CRU_006G05870 CRU_001G25410 ... | 6 | ||
Carica papaya | Anchor point | 1-to-many | CP00096G00080 CP00003G00660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00660 | 1 | ||
Tree-based ortholog | many-to-many | CP00011G00600 CP00096G00080 CP00012G00980 ... | 4 | ||
Citrullus lanatus | Anchor point | 1-to-many | CL07G18270 CL05G01040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G18270 | 1 | ||
Tree-based ortholog | many-to-many | CL08G10420 CL05G01040 | 2 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00001G04270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00328G00120 | 1 | ||
Tree-based ortholog | many-to-many | CS09011G00010 CS00386G00010 CS11317G00010 ... | 6 | ||
Cucumis melo | Anchor point | 1-to-many | CM00006G01050 CM00027G02370 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G02370 | 1 | ||
Tree-based ortholog | many-to-many | CM00014G07610 CM00006G01050 CM00008G04350 ... | 4 | ||
Eucalyptus grandis | Anchor point | 1-to-many | EG0001G12020 EG0004G13920 EG0005G07330 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G07370 | 1 | ||
Tree-based ortholog | many-to-many | EG0005G07370 EG0005G07340 EG0005G07330 ... | 9 | ||
Fragaria vesca | Anchor point | 1-to-many | FV7G05900 FV5G05180 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV5G05200 FV5G05190 | 2 | ||
Tree-based ortholog | many-to-many | FV5G05190 FV5G05310 FV5G05180 ... | 14 | ||
Glycine max | Orthologous gene family | 1-to-many | GM05G36870 GM08G02670 | 2 | |
Anchor point | 1-to-many | GM07G06201 GM06G13270 GM08G02670 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G36870 GM08G02670 | 2 | ||
Tree-based ortholog | many-to-many | GM11G03870 GM01G41560 | 2 | ||
Gossypium raimondii | Anchor point | 1-to-many | GR04G13340 GR08G25430 GR03G07930 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G13340 | 1 | ||
Tree-based ortholog | many-to-many | GR04G13340 GR03G07930 GR03G07950 ... | 13 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G046860 | 1 | |
Anchor point | 1-to-many | LJ3G034570 LJ4G046850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G046860 | 1 | ||
Tree-based ortholog | many-to-many | LJ4G046850 LJ2G034140 | 2 | ||
Malus domestica | Anchor point | 1-to-many | MD01G021740 MD07G019940 MD02G016970 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G016990 MD06G010100 | 2 | ||
Tree-based ortholog | many-to-many | MD16G001740 MD02G016970 MD00G478530 ... | 6 | ||
Manihot esculenta | Anchor point | 1-to-many | ME03581G00800 ME03175G00260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03175G00260 ME10599G00010 | 2 | ||
Tree-based ortholog | many-to-many | ME10599G00010 ME03175G00260 ME11581G00880 ... | 5 | ||
Medicago truncatula | Anchor point | 1-to-many | MT3G091200 MT5G009190 MT7G117350 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G099515 | 1 | ||
Tree-based ortholog | many-to-many | MT5G009210 MT5G009190 MT5G009200 ... | 6 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G04130 | 1 | |
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G04070 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00041G01300 PP00014G00810 | 2 | |
Populus trichocarpa | Anchor point | 1-to-many | PT03G13990 PT02G17030 PT14G09820 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G09170 PT03G13990 | 2 | ||
Tree-based ortholog | many-to-many | PT01G09170 PT03G13990 PT12G01140 ... | 6 | ||
Prunus persica | Anchor point | 1-to-many | PPE_002G29880 PPE_002G18080 PPE_005G12700 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G12810 | 1 | ||
Tree-based ortholog | many-to-many | PPE_005G12740 PPE_005G12760 PPE_005G12710 ... | 13 | ||
Ricinus communis | Anchor point | 1-to-many | RC29742G00630 RC30169G02740 RC30190G05430 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G05430 | 1 | ||
Tree-based ortholog | many-to-many | RC30190G05430 RC27401G00110 RC30169G02800 | 3 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL01G095810 SL08G082310 SL03G083460 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G082310 | 1 | ||
Tree-based ortholog | many-to-many | SL10G081790 SL01G006910 SL01G096650 ... | 9 | ||
Solanum tuberosum | Anchor point | 1-to-many | ST03G013410 ST08G028060 ST01G033250 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G028060 | 1 | ||
Tree-based ortholog | many-to-many | ST10G026320 ST01G034150 ST01G033250 ... | 7 | ||
Thellungiella parvula | Anchor point | 1-to-many | TP6G15280 TP5G01650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G15280 | 1 | ||
Tree-based ortholog | many-to-many | TP5G01860 TP4G28220 TP4G18160 ... | 9 | ||
Theobroma cacao | Anchor point | 1-to-many | TC0001G34090 TC0003G19600 TC0003G29270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G29320 | 1 | ||
Tree-based ortholog | many-to-many | TC0003G29320 TC0003G29300 TC0003G29270 ... | 8 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G55480 ZM05G02940 | 2 |