Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
TP1G21560
(Thellungiella parvula)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Thellungiella parvula | Orthologous gene family | TP1G21560 | 1 |  |
| Anchor point | TP2G04720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TP1G21560 | 1 | ||
| Tree-based ortholog | TP1G21560 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00074G00080 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00074G00080 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G26200 | 1 | |
| Anchor point | 1-to-1 | AL1G26200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G26200 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL1G26200 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G27210 | 1 | |
| Anchor point | 1-to-1 | AT1G27210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G27210 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G27210 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G03960 | 1 | |
| Anchor point | 1-to-many | BV5G01960 BV6G03960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G03960 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G03960 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G30510 | 1 | |
| Anchor point | 1-to-many | BR08G23650 BR09G30510 BR01G24920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G30510 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR09G30510 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G22820 | 1 | |
| Anchor point | 1-to-many | CRU_001G22820 CRU_002G05120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G22820 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_001G22820 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00005G03110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G03110 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00005G03110 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G08300 | 1 | |
| Citrullus lanatus | Anchor point | 1-to-1 | CL06G17180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G08940 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL08G08940 | 1 | ||
| Citrus sinensis | Anchor point | 1-to-many | CS00003G03320 CS00020G02080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G03320 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00003G03320 | 1 | ||
| Cucumis melo | Anchor point | 1-to-1 | CM00030G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00096G00130 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00096G00130 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G27990 | 1 | |
| Anchor point | 1-to-many | EG0002G27990 EG0011G24310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G27990 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G27990 | 1 | ||
| Fragaria vesca | Anchor point | 1-to-many | FV4G22630 FV5G17940 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G22630 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV4G22630 | 1 | ||
| Glycine max | Anchor point | 1-to-many | GM05G01680 GM17G10206 GM01G04500 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G04500 GM02G03050 | 2 | ||
| Tree-based ortholog | 1-to-many | GM02G03050 GM01G04500 | 2 | ||
| Gossypium raimondii | Anchor point | 1-to-many | GR09G34570 GR05G18800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G18800 | 1 | ||
| Tree-based ortholog | 1-to-many | GR05G18800 GR09G34570 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G013990 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G013990 | 1 | ||
| Malus domestica | Anchor point | 1-to-many | MD13G005770 MD06G014870 MD16G004630 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G005770 MD16G004630 | 2 | ||
| Tree-based ortholog | 1-to-many | MD16G004630 MD13G005770 | 2 | ||
| Manihot esculenta | Anchor point | 1-to-many | ME11495G01010 ME04209G00330 ME12794G01540 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11495G01010 ME04209G00330 | 2 | ||
| Tree-based ortholog | 1-to-many | ME04209G00330 ME11495G01010 | 2 | ||
| Medicago truncatula | Anchor point | 1-to-many | MT5G036950 MT4G107110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G036950 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT5G036950 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS02G50640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G13600 | 1 | ||
| Tree-based ortholog | 1-to-many | OS06G13600 OS02G50640 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00049G00820 PP00009G01020 PP00184G00300 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00049G00820 PP00009G01020 PP00387G00080 ... | 4 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT10G03890 PT15G06920 PT12G07440 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G03890 PT08G19210 | 2 | ||
| Tree-based ortholog | 1-to-many | PT08G19210 PT10G03890 | 2 | ||
| Prunus persica | Anchor point | 1-to-many | PPE_005G18680 PPE_001G27370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G27370 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_001G27370 | 1 | ||
| Ricinus communis | Anchor point | 1-to-1 | RC29736G00900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29736G00900 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29736G00900 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL03G113680 SL05G006550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G006550 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL05G006550 | 1 | ||
| Solanum tuberosum | Anchor point | 1-to-many | ST05G011880 ST03G027020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G027020 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST05G011880 | 1 | ||
| Theobroma cacao | Anchor point | 1-to-many | TC0002G23780 TC0003G00180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G23780 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0002G23780 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV01G13180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13180 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV01G13180 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G16980 | 1 | |
| Tree-based ortholog | 1-to-many | ZM06G09530 ZM09G00340 ZM06G16980 ... | 6 |