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Integrative Orthology Viewer:
TC0010G05660
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0005G04550 TC0009G32390 TC0010G05660 | 3 |  |
| Anchor point | TC0005G04550 TC0009G32390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0010G05660 | 1 | ||
| Tree-based ortholog | TC0010G05660 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00034G00470 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00034G00470 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL0G09900 AL4G13070 AL4G13120 | 3 | |
| Anchor point | many-to-many | AL5G25250 AL4G25830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G25830 | 1 | ||
| Tree-based ortholog | 1-to-many | AL5G25250 AL4G25830 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G28640 | 1 | |
| Anchor point | many-to-many | AT3G55150 AT1G07725 AT2G39380 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G39380 | 1 | ||
| Tree-based ortholog | 1-to-many | AT3G55150 AT2G39380 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G07260 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G07260 | 1 | ||
| Brassica rapa | Anchor point | many-to-many | BR04G04240 BR05G06330 BR04G23380 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G04240 | 1 | ||
| Tree-based ortholog | 1-to-many | BR09G36140 BR04G04240 BR05G06340 ... | 6 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G09410 | 1 | |
| Anchor point | many-to-many | CRU_001G06690 CRU_005G20510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G20510 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_005G20510 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00001G03050 CP30198G00010 | 2 | |
| Anchor point | many-to-many | CP00001G03050 CP00114G00080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G03050 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00001G03050 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G00900 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-many | CL03G01970 CL10G18790 | 2 | |
| Anchor point | many-to-many | CL02G13880 CL10G18790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G18790 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL02G13880 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00024G01360 | 1 | |
| Anchor point | many-to-many | CS00024G01360 CS00014G01090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00024G01360 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00024G01360 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00020G02240 | 1 | |
| Anchor point | many-to-many | CM00063G00180 CM00011G02140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00020G02240 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00063G00180 | 1 | ||
| Eucalyptus grandis | Anchor point | many-to-1 | EG0007G21760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G21760 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0007G21760 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G32340 FV7G25390 | 2 | |
| Anchor point | many-to-many | FV7G25390 FV0G32340 FV6G14000 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G25390 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV7G25390 | 1 | ||
| Glycine max | Anchor point | many-to-many | GM10G05280 GM13G19660 GM13G40680 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G15420 GM12G08020 | 2 | ||
| Tree-based ortholog | 1-to-many | GM19G35880 GM03G33160 GM10G05280 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G10740 GR02G25320 GR09G31660 | 3 | |
| Anchor point | many-to-many | GR09G31660 GR03G13750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G31660 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR09G31660 | 1 | ||
| Lotus japonicus | Anchor point | many-to-1 | LJ1G063320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G063320 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G063320 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G198410 MD00G285560 MD00G289240 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G289240 MD00G385570 MD00G285560 ... | 5 | ||
| Tree-based ortholog | 1-to-many | MD00G364670 MD00G285560 MD00G385570 ... | 5 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00506G00410 ME00687G00010 ME03606G00090 ... | 5 | |
| Anchor point | many-to-many | ME00506G00410 ME03750G00170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03606G00090 | 1 | ||
| Tree-based ortholog | 1-to-many | ME03606G00090 ME03606G00080 | 2 | ||
| Medicago truncatula | Anchor point | many-to-many | MT1G067460 MT4G062330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G062330 | 1 | ||
| Tree-based ortholog | 1-to-many | MT1G067460 MT1G067480 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G35470 | 1 | |
| Tree-based ortholog | 1-to-many | OS12G01040 OS11G01050 OS11G42989 ... | 5 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00169G00210 PP00070G00130 PP00177G00690 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00177G00690 PP00169G00210 PP00376G00390 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G04870 PT09G02690 PT10G21240 | 3 | |
| Anchor point | many-to-many | PT08G04870 PT06G21430 PT10G21240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G21240 PT08G04870 | 2 | ||
| Tree-based ortholog | 1-to-many | PT08G04870 PT10G21240 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G08500 | 1 | |
| Anchor point | many-to-many | PPE_006G08500 PPE_006G25510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G08500 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G25510 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29163G00010 RC29587G00020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29587G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29587G00020 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL05G054820 SL06G075610 SL11G073010 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G005830 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL05G054820 | 1 | ||
| Solanum tuberosum | Anchor point | many-to-many | ST09G005800 ST05G027900 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST09G005810 ST09G005800 | 2 | ||
| Tree-based ortholog | 1-to-1 | ST05G027900 | 1 | ||
| Thellungiella parvula | Anchor point | many-to-1 | TP5G07270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07270 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP5G07270 | 1 | ||
| Vitis vinifera | Anchor point | many-to-many | VV06G04280 VV08G02160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G02160 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G02160 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G31110 ZM07G15220 | 2 | |
| Tree-based ortholog | 1-to-1 | ZM05G44920 | 1 |