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Integrative Orthology Viewer:
TC0010G04250
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0005G22990 TC0005G23000 TC0005G32700 ... | 6 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0005G23000 TC0005G32720 TC0010G04250 ... | 6 | ||
| Tree-based ortholog | TC0010G04250 TC0010G04650 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00095G01480 | 1 | |
| Tree-based ortholog | many-to-many | ATR_00176G00190 ATR_00095G01480 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G05840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G13530 | 1 | ||
| Tree-based ortholog | many-to-1 | AL3G05840 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G48670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G48670 | 1 | ||
| Tree-based ortholog | many-to-many | AT5G48670 AT5G27810 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G09940 | 1 | |
| Tree-based ortholog | many-to-1 | BV4G09940 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G15040 BR09G24520 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR05G15040 BR09G24520 | 2 | ||
| Tree-based ortholog | many-to-many | BR09G24520 BR05G15040 BR00G07870 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G05050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G05050 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_003G05050 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00265G00040 CP00265G00080 CP00358G00020 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP26058G00020 CP28448G00010 CP24608G00010 ... | 12 | ||
| Tree-based ortholog | many-to-many | CP00139G00400 CP01256G00010 CP33457G00020 ... | 60 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G17550 | 1 | |
| Tree-based ortholog | many-to-1 | CL03G17550 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00105G00050 | 1 | |
| Tree-based ortholog | many-to-1 | CS00105G00050 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00025G00150 | 1 | |
| Tree-based ortholog | many-to-1 | CM00025G00150 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0005G14170 EG0005G14180 EG0005G14160 ... | 4 | |
| Tree-based ortholog | many-to-1 | EG0002G14670 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV6G03720 FV1G16270 FV6G03630 | 3 | |
| Tree-based ortholog | many-to-many | FV6G03720 FV6G03630 FV1G16270 | 3 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM18G04760 GM11G33460 | 2 | |
| Tree-based ortholog | many-to-many | GM18G04760 GM11G33460 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR04G22970 GR04G29200 GR04G05470 | 3 | |
| Tree-based ortholog | many-to-many | GR04G29200 GR13G21060 GR13G21030 ... | 7 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G003030 | 1 | |
| Tree-based ortholog | many-to-many | LJ5G001090 LJ1G046200 LJ6G006320 ... | 6 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD15G030580 MD08G018940 | 2 | |
| Tree-based ortholog | many-to-many | MD08G018940 MD15G030580 | 2 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME10305G00750 | 1 | |
| Tree-based ortholog | many-to-many | ME02264G00760 ME10305G00750 | 2 | ||
| Medicago truncatula | Anchor point | N/A | MT1G114730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT3G466980 MT3G065100 | 2 | ||
| Tree-based ortholog | many-to-many | MT4G084780 MT3G065100 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G18440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G18440 | 1 | ||
| Tree-based ortholog | many-to-many | OS01G67890 OS01G18420 OS04G25930 ... | 12 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00037G01700 | 1 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G00170 PT05G00240 | 2 | |
| Tree-based ortholog | many-to-many | PT05G00240 PT13G00170 PT13G01810 | 3 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G58170 | 1 | |
| Tree-based ortholog | many-to-many | PPE_006G30990 PPE_006G30980 PPE_003G00810 ... | 5 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30199G00030 | 1 | |
| Tree-based ortholog | many-to-many | RC30199G00030 RC30128G03720 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G102260 | 1 | |
| Tree-based ortholog | many-to-1 | SL01G102260 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G039140 | 1 | |
| Tree-based ortholog | many-to-1 | ST01G039140 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G04750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G04750 | 1 | ||
| Tree-based ortholog | many-to-many | TP6G04880 TP6G04860 TP3G04750 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G10360 | 1 | |
| Tree-based ortholog | many-to-1 | VV14G10360 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G30410 ZM05G08350 | 2 | |
| Tree-based ortholog | many-to-many | ZM04G02630 ZM05G08350 ZM05G30410 | 3 |