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Integrative Orthology Viewer:
TC0009G29890
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0009G29890 TC0010G02140 | 2 |  |
| Anchor point | TC0010G02140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0009G29890 | 1 | ||
| Tree-based ortholog | TC0009G29890 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G03780 | 1 | |
| Anchor point | 1-to-1 | ATR_00029G03670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G03780 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00029G03780 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G14250 AL5G26080 AL6G05340 | 3 | |
| Anchor point | 1-to-many | AL1G06860 AL4G14250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G14250 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL5G26080 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G29690 AT3G55870 AT5G05730 | 3 | |
| Anchor point | 1-to-many | AT1G07270 AT2G29680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G29690 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G55870 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV7G05190 BV7G05210 | 2 | |
| Anchor point | 1-to-many | BV7G05190 BV2G04110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05210 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV7G05190 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G02070 BR10G23960 | 2 | |
| Anchor point | 1-to-many | BR05G13800 BR10G00830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G23210 | 1 | ||
| Tree-based ortholog | 1-to-many | BR03G02080 BR05G13800 BR10G00830 ... | 6 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G21330 CRU_006G04490 CRU_006G04520 | 3 | |
| Anchor point | 1-to-many | CRU_001G06190 CRU_004G10490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G04490 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_005G21330 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00019G01920 | 1 | |
| Anchor point | 1-to-many | CP00019G01920 CP00112G00390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00112G00390 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00019G01920 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14820 | 1 | |
| Tree-based ortholog | 1-to-many | CR06G11700 CR03G08880 CR01G10620 ... | 4 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL04G00660 CL04G00680 CL11G01130 | 3 | |
| Anchor point | 1-to-1 | CL02G19900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G01130 | 1 | ||
| Tree-based ortholog | 1-to-many | CL11G01130 CL04G00680 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00021G00790 CS00026G00950 | 2 | |
| Anchor point | 1-to-many | CS00021G00790 CS00026G00940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00790 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00026G00950 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00008G02410 CM00010G02420 | 2 | |
| Anchor point | 1-to-many | CM00084G00210 CM00008G02350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G02420 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00010G02420 CM00008G02410 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G24230 | 1 | |
| Anchor point | 1-to-many | EG0002G17990 EG0007G24230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G17990 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0002G17990 EG0007G24230 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G29150 | 1 | |
| Anchor point | 1-to-many | FV7G29150 FV3G22150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G29150 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV3G22150 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM10G43210 GM18G03263 GM18G03270 ... | 4 | |
| Anchor point | 1-to-many | GM18G03256 GM14G06590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G23680 | 1 | ||
| Tree-based ortholog | 1-to-1 | GM18G03270 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G11550 GR09G32220 | 2 | |
| Anchor point | 1-to-many | GR01G11550 GR03G12350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G11550 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR01G11550 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G073710 LJ5G040360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G040360 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ5G040360 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G031450 MD00G170730 MD00G175910 ... | 5 | |
| Anchor point | 1-to-many | MD11G006270 MD14G017050 MD03G005420 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G170730 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G338130 MD11G006270 MD00G170700 ... | 10 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03150G00330 ME08265G03110 | 2 | |
| Anchor point | 1-to-many | ME08265G03100 ME03150G00330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03150G00330 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME03150G00330 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G114520 MT3G070290 MT3G076770 ... | 4 | |
| Anchor point | 1-to-many | MT5G082260 MT3G463490 MT3G070290 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G114520 | 1 | ||
| Tree-based ortholog | 1-to-many | MT3G070290 MT3G467000 MT3G076770 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G15780 OS03G61120 | 2 | |
| Anchor point | 1-to-1 | OS01G63710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G61120 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G61120 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01130 | 1 | |
| Tree-based ortholog | 1-to-many | OL04G01040 OL07G01130 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00077G00900 PP00154G00470 PP00154G00780 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00077G00900 PP00154G00780 PP00154G00470 | 3 | ||
| Tree-based ortholog | 1-to-many | PP00030G00600 PP08410G00010 PP00154G00470 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT09G04430 PT10G19060 | 2 | |
| Anchor point | 1-to-many | PT01G25020 PT10G19060 PT09G04430 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G04430 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT09G04430 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G23840 | 1 | |
| Anchor point | 1-to-many | PPE_002G23830 PPE_006G00430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23840 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G00430 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29669G00390 RC29681G00290 | 2 | |
| Anchor point | 1-to-1 | RC29681G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29681G00290 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29681G00290 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G005980 SL06G006100 | 2 | |
| Anchor point | 1-to-1 | SL06G076860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G006100 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL06G006100 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G006020 | 1 | |
| Anchor point | 1-to-many | ST06G032620 ST06G005900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G006020 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST06G006020 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G12410 TP6G37170 | 2 | |
| Anchor point | 1-to-1 | TP4G12400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G12410 | 1 | ||
| Tree-based ortholog | 1-to-many | TP6G37160 TP4G12400 TP4G12410 ... | 4 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV06G02040 VV13G10700 | 2 | |
| Anchor point | 1-to-many | VV13G10710 VV06G02060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G02040 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV06G02040 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G10660 ZM01G58430 ZM05G01210 | 3 | |
| Anchor point | 1-to-1 | ZM03G26490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G10660 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM05G01210 | 1 |