Integrative Orthology Viewer: TC0008G11200 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0004G13010 TC0008G11200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | TC0008G11200 | 1 | ||
Tree-based ortholog | TC0008G11200 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00030G01270 ATR_00175G00250 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00030G01270 ATR_00175G00250 | 2 | ||
Tree-based ortholog | 1-to-many | ATR_00175G00250 ATR_00030G01270 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G38030 AL2G26800 | 2 | |
Anchor point | N/A | AL2G26800 AL1G38030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G38030 | 1 | ||
Tree-based ortholog | 1-to-many | AL1G38030 AL2G26800 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G36730 AT1G77840 | 2 | |
Anchor point | N/A | AT1G36730 AT1G77840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G36730 | 1 | ||
Tree-based ortholog | 1-to-many | AT1G36730 AT1G77840 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G07290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G07290 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G20050 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G01200 BR06G31730 BR07G19070 ... | 4 | |
Anchor point | N/A | BR07G32630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR06G31730 BR07G19070 BR07G32630 | 3 | ||
Tree-based ortholog | 1-to-many | BR00G01200 BR06G31730 BR07G32630 ... | 4 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G32170 CRU_002G23360 | 2 | |
Anchor point | N/A | CRU_001G32170 CRU_002G23360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G32170 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_001G32170 CRU_002G23360 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00049G01210 CP00116G00070 | 2 | |
Anchor point | N/A | CP00049G01210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00049G01210 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00049G01210 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G00620 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G00620 | 1 | ||
Tree-based ortholog | 1-to-1 | CR06G00620 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G10650 | 1 | |
Anchor point | N/A | CL08G10650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G10650 | 1 | ||
Tree-based ortholog | 1-to-1 | CL08G10650 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G01470 CS00042G00440 | 2 | |
Anchor point | N/A | CS00004G01470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G01470 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00004G01470 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00014G07420 | 1 | |
Anchor point | N/A | CM00014G07420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G07420 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00014G07420 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G31900 | 1 | |
Anchor point | N/A | EG0006G31900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G31900 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0006G31900 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G34220 | 1 | |
Anchor point | N/A | FV5G34220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G34220 | 1 | ||
Tree-based ortholog | 1-to-many | FV3G15930 FV5G34220 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G00220 GM02G10020 GM05G09260 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G52940 GM19G00810 GM02G00220 ... | 4 | ||
Tree-based ortholog | 1-to-many | GM19G00810 GM05G09260 GM02G00220 ... | 7 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G22010 GR09G24200 GR10G04650 | 3 | |
Anchor point | N/A | GR02G22010 GR10G04650 GR09G24200 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G22010 | 1 | ||
Tree-based ortholog | 1-to-1 | GR09G24200 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G100510 MD08G018010 MD15G029000 | 3 | |
Anchor point | N/A | MD08G018010 MD15G029000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G018010 MD15G029000 | 2 | ||
Tree-based ortholog | 1-to-1 | MD00G100510 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04065G00280 ME12455G00760 | 2 | |
Anchor point | N/A | ME04065G00280 ME12455G00760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04065G00280 ME12455G00760 | 2 | ||
Tree-based ortholog | 1-to-many | ME12455G00760 ME04065G00280 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G082940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G082940 | 1 | ||
Tree-based ortholog | 1-to-1 | MT7G082940 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G48350 OS06G48355 OS09G15770 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS09G15770 OS06G48355 OS06G48350 ... | 4 | ||
Tree-based ortholog | 1-to-many | OS06G48355 OS06G48350 OS09G15770 ... | 4 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G03940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03940 | 1 | ||
Tree-based ortholog | 1-to-1 | OL07G03940 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00093G00640 PP00626G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00093G00640 PP00626G00010 | 2 | ||
Tree-based ortholog | 1-to-many | PP00626G00010 PP00093G00640 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G09360 PT04G11220 PT17G12220 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G09360 PT04G11220 PT17G12220 | 3 | ||
Tree-based ortholog | 1-to-many | PT17G10260 PT04G11220 PT04G09360 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G51150 PPE_003G12540 | 2 | |
Anchor point | N/A | PPE_001G51150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G51150 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_003G12540 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29908G01030 | 1 | |
Anchor point | N/A | RC29908G01030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29908G01030 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29908G01030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G091210 SL02G091220 SL03G034430 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G091210 | 1 | ||
Tree-based ortholog | 1-to-many | SL03G034430 SL03G034440 SL02G091220 ... | 4 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G029760 ST02G029770 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST02G029770 ST02G029760 | 2 | ||
Tree-based ortholog | 1-to-many | ST02G029770 ST02G029760 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G31120 TP5G33000 | 2 | |
Anchor point | N/A | TP5G33000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G31120 | 1 | ||
Tree-based ortholog | 1-to-many | TP1G31120 TP5G33000 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G02830 | 1 | |
Anchor point | N/A | VV18G02830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G02830 | 1 | ||
Tree-based ortholog | 1-to-1 | VV18G02830 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G40000 ZM05G10030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G40000 ZM05G10030 | 2 | ||
Tree-based ortholog | 1-to-many | ZM04G40000 ZM05G10030 | 2 |