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Integrative Orthology Viewer:
TC0008G04140
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0008G04140 TC0008G04160 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0008G04140 | 1 | ||
| Tree-based ortholog | TC0008G04160 TC0008G04140 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00033G00490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00033G00490 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00033G00490 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G33660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G33660 | 1 | ||
| Tree-based ortholog | many-to-1 | AL4G33660 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G45730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G45730 | 1 | ||
| Tree-based ortholog | many-to-1 | AT2G45730 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G20950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G20950 | 1 | ||
| Tree-based ortholog | many-to-1 | BV6G20950 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G22480 BR04G27210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G27210 | 1 | ||
| Tree-based ortholog | many-to-many | BR03G22480 BR04G27210 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G27360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G27360 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_004G27360 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G16640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G16640 | 1 | ||
| Tree-based ortholog | many-to-1 | CR12G16640 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G14140 | 1 | |
| Anchor point | N/A | CL08G14140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G14140 | 1 | ||
| Tree-based ortholog | many-to-1 | CL08G14140 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G05450 | 1 | |
| Anchor point | N/A | CS00002G05450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G05450 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00002G05450 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00014G03670 | 1 | |
| Anchor point | N/A | CM00014G03670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G03670 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00014G03670 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G13340 | 1 | |
| Anchor point | N/A | EG0006G13340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G13340 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0006G13340 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G38670 | 1 | |
| Anchor point | N/A | FV2G38670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G38670 | 1 | ||
| Tree-based ortholog | many-to-1 | FV2G38670 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM14G40460 GM17G37700 | 2 | |
| Anchor point | N/A | GM14G40460 GM17G37700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G37700 GM14G40460 | 2 | ||
| Tree-based ortholog | many-to-many | GM17G37700 GM14G40460 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR09G19510 | 1 | |
| Anchor point | N/A | GR09G19510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G19510 | 1 | ||
| Tree-based ortholog | many-to-1 | GR09G19510 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G056010 MD00G146940 MD00G193160 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G193160 MD00G218800 | 2 | ||
| Tree-based ortholog | many-to-many | MD00G146940 MD00G218800 MD00G193160 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME07575G00030 ME07575G00040 | 2 | |
| Anchor point | N/A | ME07575G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07575G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G024920 | 1 | |
| Anchor point | N/A | MT1G024920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G024920 | 1 | ||
| Tree-based ortholog | many-to-1 | MT1G024920 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G02150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G02150 | 1 | ||
| Tree-based ortholog | many-to-1 | OS04G02150 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL05G03590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G03590 | 1 | ||
| Tree-based ortholog | many-to-1 | OL05G03590 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00223G00740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00223G00740 | 1 | ||
| Tree-based ortholog | many-to-1 | PP00223G00740 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G02330 PT05G23820 | 2 | |
| Anchor point | N/A | PT05G23820 PT02G02330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G02330 PT05G23820 | 2 | ||
| Tree-based ortholog | many-to-many | PT05G23820 PT02G02330 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G37520 | 1 | |
| Anchor point | N/A | PPE_001G37520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G37520 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_001G37520 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30170G05300 | 1 | |
| Anchor point | N/A | RC30170G05300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G05300 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30170G05300 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G081360 | 1 | |
| Anchor point | N/A | SL04G081360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G081360 | 1 | ||
| Tree-based ortholog | many-to-1 | SL04G081360 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G034740 | 1 | |
| Anchor point | N/A | ST04G034740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G034740 | 1 | ||
| Tree-based ortholog | many-to-1 | ST04G034740 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G27780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G27780 | 1 | ||
| Tree-based ortholog | many-to-1 | TP4G27780 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G10440 | 1 | |
| Anchor point | N/A | VV18G10440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G10440 | 1 | ||
| Tree-based ortholog | many-to-1 | VV18G10440 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM03G22190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G22190 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM03G22190 | 1 |