Integrative Orthology Viewer: TC0005G24860 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0005G24860 TC0009G20360 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | TC0005G24860 | 1 | ||
Tree-based ortholog | TC0005G24860 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Anchor point | N/A | ATR_00068G00440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00068G00440 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00068G00440 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G08400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL6G20070 AL6G20060 | 2 | ||
Tree-based ortholog | 1-to-1 | AL2G08400 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G64740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G19780 AT5G19770 | 2 | ||
Tree-based ortholog | 1-to-1 | AT1G64740 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G10250 BV0G44960 | 2 | |
Anchor point | N/A | BV0G10250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11350 | 1 | ||
Tree-based ortholog | 1-to-1 | BV4G11350 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G09740 BR10G15220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G09750 | 1 | ||
Tree-based ortholog | 1-to-many | BR02G09750 BR10G15210 BR10G15220 ... | 5 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G09090 CRU_006G17650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G17660 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_002G09090 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00051G01370 CP00119G00500 | 2 | |
Anchor point | N/A | CP00051G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00051G01370 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00051G01370 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR04G00210 CR03G10780 | 2 | |
Tree-based ortholog | 1-to-many | CR03G10780 CR04G00210 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G07210 CL02G24370 CL10G08260 ... | 4 | |
Anchor point | N/A | CL10G11610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G11610 | 1 | ||
Tree-based ortholog | 1-to-1 | CL10G11610 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00006G00370 CS00117G00220 CS00123G00130 | 3 | |
Anchor point | N/A | CS00117G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00123G00130 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00123G00130 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00022G05540 CM00098G00370 | 2 | |
Anchor point | N/A | CM00098G00370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G05540 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00098G00370 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G17550 EG0002G30080 EG0006G17790 | 3 | |
Anchor point | N/A | EG0001G17550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G30080 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0001G17550 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G37350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G02770 | 1 | ||
Tree-based ortholog | 1-to-1 | FV3G37350 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G29000 GM08G12140 GM16G04420 ... | 6 | |
Anchor point | N/A | GM19G28990 GM16G04420 GM16G27030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G29000 GM08G12140 | 2 | ||
Tree-based ortholog | 1-to-many | GM16G27030 GM16G04420 GM19G28990 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G08640 GR07G26100 GR07G34600 ... | 7 | |
Anchor point | N/A | GR07G26100 GR13G11510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G11510 | 1 | ||
Tree-based ortholog | 1-to-many | GR07G26100 GR07G34600 GR13G11510 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G054420 LJ4G041450 | 2 | |
Anchor point | N/A | LJ1G054420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G041450 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ1G054420 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G342470 MD00G472840 MD12G000530 | 3 | |
Anchor point | N/A | MD14G000180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G000850 MD00G472840 MD00G342470 | 3 | ||
Tree-based ortholog | 1-to-1 | MD12G000530 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03614G02220 ME04020G00100 ME06582G01240 | 3 | |
Anchor point | N/A | ME03614G02220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06582G01240 | 1 | ||
Tree-based ortholog | 1-to-1 | ME03614G02220 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G041400 MT2G041670 MT6G029190 ... | 5 | |
Anchor point | N/A | MT7G085800 MT6G029190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G085980 | 1 | ||
Tree-based ortholog | 1-to-many | MT6G029190 MT7G085800 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G11970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G38730 | 1 | ||
Tree-based ortholog | 1-to-1 | OS03G11970 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G01340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL12G01340 OL08G03660 | 2 | ||
Tree-based ortholog | 1-to-many | OL08G03660 OL12G01340 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G03320 PP00005G01140 PP00011G00860 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00341G00070 PP00215G00270 PP00341G00090 | 3 | ||
Tree-based ortholog | 1-to-1 | PP00215G00280 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G00460 PT03G22030 PT13G05680 ... | 4 | |
Anchor point | N/A | PT13G05680 PT19G03600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G00460 | 1 | ||
Tree-based ortholog | 1-to-many | PT13G05680 PT19G03600 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G02890 | 1 | |
Anchor point | N/A | PPE_007G02890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G02890 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_007G02890 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29950G00040 | 1 | |
Anchor point | N/A | RC29950G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30084G00100 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29950G00040 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G087880 | 1 | |
Tree-based ortholog | 1-to-many | SL02G091870 SL04G077020 SL08G006890 ... | 6 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G010740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G032790 | 1 | ||
Tree-based ortholog | 1-to-1 | ST12G032790 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G01790 | 1 | |
Tree-based ortholog | 1-to-many | TP4G01790 TP6G24620 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G17120 VV03G09220 VV06G07590 ... | 6 | |
Anchor point | N/A | VV08G08540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G08540 | 1 | ||
Tree-based ortholog | 1-to-1 | VV06G07590 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G51400 ZM02G37450 ZM05G03360 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G25130 ZM02G37450 | 2 | ||
Tree-based ortholog | 1-to-1 | ZM09G25770 | 1 |