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Integrative Orthology Viewer:
TC0005G11030
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0005G11030 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0005G11030 | 1 | ||
| Tree-based ortholog | TC0005G11030 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00066G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G00220 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR_00066G00220 ATR_00066G00230 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G11420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G11420 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL2G11420 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G65480 | 1 | |
| Anchor point | N/A | AT1G65480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G65480 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G65480 AT4G20370 | 2 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G14750 | 1 | |
| Anchor point | N/A | BV4G14750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G14750 | 1 | ||
| Tree-based ortholog | 1-to-many | BV9G02420 BV4G14750 | 2 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR02G17550 | 1 | |
| Anchor point | N/A | BR07G23570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G17550 | 1 | ||
| Tree-based ortholog | 1-to-many | BR02G17550 BR07G23570 BR07G32070 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G10480 | 1 | |
| Anchor point | N/A | CRU_002G10480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G10480 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_002G10480 CRU_007G19850 | 2 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP32595G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP32595G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP32595G00010 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G09890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G09890 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL03G09890 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00357G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00357G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00357G00010 CS00393G00070 | 2 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00012G00260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G00260 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00012G00260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G12010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G12010 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G12010 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV0G04880 FV3G15220 FV6G00240 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G00240 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G00240 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM16G26660 GM16G26690 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G26690 GM16G26660 | 2 | ||
| Tree-based ortholog | 1-to-many | GM16G04830 GM19G28400 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G26460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G26460 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR04G26460 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G053430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G053430 | 1 | ||
| Tree-based ortholog | 1-to-many | LJ1G041390 LJ1G041430 | 2 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD12G025450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G025450 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD12G025450 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08884G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08884G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME08506G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT6G033040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G033040 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT7G085040 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS01G11940 OS06G06300 OS06G06320 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G06300 OS06G06320 | 2 | ||
| Tree-based ortholog | 1-to-many | OS01G11940 OS06G06300 OS06G06320 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00243G00170 PP00111G00110 PP00068G00030 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00076G00760 PP00032G00670 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G07770 PT10G17970 | 2 | |
| Anchor point | N/A | PT10G17970 PT08G07770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G07770 | 1 | ||
| Tree-based ortholog | 1-to-many | PT08G07770 PT10G17970 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G36710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36710 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G36710 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29929G00210 | 1 | |
| Anchor point | N/A | RC29929G00200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00210 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29929G00210 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G063100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G063100 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL05G055660 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G010860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G010860 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST05G028860 | 1 | ||
| Thellungiella parvula | Anchor point | N/A | TP5G20330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP7G18730 TP5G32040 | 2 | ||
| Tree-based ortholog | 1-to-many | TP5G20330 TP5G32040 TP7G18730 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G11870 | 1 | |
| Tree-based ortholog | 1-to-many | VV17G06940 VV00G07110 | 2 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM06G09030 ZM08G05870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G09030 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM08G05870 ZM06G09030 | 2 |