Integrative Orthology Viewer: TC0004G27770 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0004G27770 TC0005G25050 TC0005G25080 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | TC0004G27770 | 1 | ||
Tree-based ortholog | TC0004G27770 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Anchor point | N/A | ATR_00057G01210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00057G01210 ATR_00057G01220 ATR_00057G01230 | 3 | ||
Tree-based ortholog | 1-to-many | ATR_00057G01220 ATR_00057G01230 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G06450 | 1 | |
Anchor point | N/A | AL3G06450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G06450 | 1 | ||
Tree-based ortholog | 1-to-1 | AL3G06450 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G06350 | 1 | |
Anchor point | N/A | AT3G06350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G06350 | 1 | ||
Tree-based ortholog | 1-to-1 | AT3G06350 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G73300 BV0G73310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G73300 | 1 | ||
Tree-based ortholog | 1-to-many | BV0G73300 BV0G73310 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G40310 BR02G34270 BR03G30410 | 3 | |
Anchor point | N/A | BR02G34270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G40310 | 1 | ||
Tree-based ortholog | 1-to-many | BR02G34270 BR01G40310 BR03G30410 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G05550 CRU_003G05560 | 2 | |
Anchor point | N/A | CRU_003G05550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G05560 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_003G05560 CRU_003G05550 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00016G00990 | 1 | |
Anchor point | N/A | CP00016G00990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00016G00990 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00016G00990 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR08G05930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G05930 | 1 | ||
Tree-based ortholog | 1-to-1 | CR08G05930 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G08150 CL02G01150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G01150 | 1 | ||
Tree-based ortholog | 1-to-1 | CL02G01150 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00011G02410 | 1 | |
Anchor point | N/A | CS00001G08450 CS00011G02410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G02410 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00011G02410 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G04770 CM00045G02580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00045G02580 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00045G02580 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G35880 EG0008G35890 EG0010G02300 | 3 | |
Anchor point | N/A | EG0008G35880 EG0002G14270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G02300 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0010G02300 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G19500 FV1G19520 FV6G07230 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G19520 | 1 | ||
Tree-based ortholog | 1-to-many | FV1G19500 FV1G19520 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM00G01180 GM01G20760 GM20G37400 | 3 | |
Anchor point | N/A | GM03G40236 GM19G42830 GM20G37400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM01G20760 | 1 | ||
Tree-based ortholog | 1-to-many | GM01G20760 GM00G01180 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G25040 GR06G07510 | 2 | |
Anchor point | N/A | GR06G07510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G07510 | 1 | ||
Tree-based ortholog | 1-to-1 | GR06G07510 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G008220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G008220 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ4G008220 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G196450 MD00G199470 MD00G208810 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G014110 | 1 | ||
Tree-based ortholog | 1-to-many | MD01G014110 MD00G157720 MD15G026460 ... | 5 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04140 ME03614G04150 ME05214G00320 | 3 | |
Anchor point | N/A | ME03614G04120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05214G00320 | 1 | ||
Tree-based ortholog | 1-to-1 | ME05214G00320 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G090620 | 1 | |
Anchor point | N/A | MT7G114190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G090620 | 1 | ||
Tree-based ortholog | 1-to-1 | MT4G090620 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G27750 OS01G27770 OS12G34874 | 3 | |
Anchor point | N/A | OS12G34874 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G34874 | 1 | ||
Tree-based ortholog | 1-to-many | OS01G27770 OS01G27750 OS12G34874 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G02660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G02660 | 1 | ||
Tree-based ortholog | 1-to-1 | OL12G02660 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00047G00100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00047G00100 | 1 | ||
Tree-based ortholog | 1-to-1 | PP00047G00100 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G04340 PT08G19610 PT10G01900 ... | 6 | |
Anchor point | N/A | PT05G04330 PT10G01900 PT13G02980 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G02060 PT10G01900 | 2 | ||
Tree-based ortholog | 1-to-many | PT10G01900 PT10G02060 PT08G19610 | 3 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G17060 | 1 | |
Anchor point | N/A | PPE_006G33800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G17060 | 1 | ||
Tree-based ortholog | 1-to-many | PPE_006G17050 PPE_006G17060 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29726G00880 RC30128G00870 RC30128G00880 | 3 | |
Anchor point | N/A | RC29726G00880 RC30128G00860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29726G00880 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29726G00880 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G067750 | 1 | |
Anchor point | N/A | SL01G067750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G067750 | 1 | ||
Tree-based ortholog | 1-to-1 | SL01G067750 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G021770 | 1 | |
Anchor point | N/A | ST01G021770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G021770 | 1 | ||
Tree-based ortholog | 1-to-many | ST07G014140 ST01G021770 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G05260 | 1 | |
Anchor point | N/A | TP3G05260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G05260 | 1 | ||
Tree-based ortholog | 1-to-1 | TP3G05260 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G03610 VV14G04450 VV14G04460 | 3 | |
Anchor point | N/A | VV05G03610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G03610 | 1 | ||
Tree-based ortholog | 1-to-1 | VV05G03610 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G12530 ZM03G17940 ZM10G05140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G05140 | 1 | ||
Tree-based ortholog | 1-to-many | ZM03G12530 ZM10G05140 ZM03G17940 | 3 |