Integrative Orthology Viewer: TC0004G06870 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0003G00330 TC0004G06870 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | TC0004G06870 | 1 | ||
Tree-based ortholog | TC0004G06870 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00058G00070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00058G00070 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00058G00070 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G23780 AL3G30350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G23780 | 1 | ||
Tree-based ortholog | 1-to-1 | AL3G30350 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G74910 AT2G04650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G74910 | 1 | ||
Tree-based ortholog | 1-to-1 | AT2G04650 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G06500 BV5G02170 | 2 | |
Anchor point | N/A | BV2G06500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G02170 | 1 | ||
Tree-based ortholog | 1-to-1 | BV2G06500 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G22900 BR04G11490 BR07G30350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G22900 | 1 | ||
Tree-based ortholog | 1-to-1 | BR04G11490 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G20490 CRU_003G25210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G20490 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_003G25210 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00035G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00035G00330 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00035G00330 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G10870 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL06G17230 CL10G12760 | 2 | |
Anchor point | N/A | CL10G12760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G12760 | 1 | ||
Tree-based ortholog | 1-to-1 | CL10G12760 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00020G01970 CS00028G00830 | 2 | |
Anchor point | N/A | CS00028G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00028G00830 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00028G00830 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00011G08640 CM00030G00480 | 2 | |
Anchor point | N/A | CM00011G08640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G08640 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00011G08640 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0009G15750 EG0011G24190 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G24190 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0009G15750 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G37980 FV5G17790 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G37980 | 1 | ||
Tree-based ortholog | 1-to-1 | FV0G37980 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G34880 GM06G19825 GM19G06900 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM19G06900 | 1 | ||
Tree-based ortholog | 1-to-many | GM19G17790 GM19G06900 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G07100 GR01G25870 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G25870 | 1 | ||
Tree-based ortholog | 1-to-1 | GR01G25870 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G006570 LJ2G016190 | 2 | |
Anchor point | N/A | LJ2G016190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G016190 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ2G016190 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G094910 MD00G155330 MD00G255480 ... | 6 | |
Anchor point | N/A | MD17G003150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G289690 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G255480 MD00G155330 MD00G335010 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04083G00520 ME12794G01470 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12794G01470 | 1 | ||
Tree-based ortholog | 1-to-1 | ME04083G00520 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G078570 MT6G008840 | 2 | |
Anchor point | N/A | MT6G008840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G008840 | 1 | ||
Tree-based ortholog | 1-to-1 | MT6G008840 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G11050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G11050 | 1 | ||
Tree-based ortholog | 1-to-1 | OS03G11050 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00008G00290 PP00018G00550 PP00044G01630 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00044G01630 PP00008G00290 PP00018G00550 | 3 | ||
Tree-based ortholog | 1-to-many | PP00008G00290 PP00018G00550 PP00044G01630 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G07550 PT15G07050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G07050 PT12G07550 | 2 | ||
Tree-based ortholog | 1-to-many | PT15G07050 PT12G07550 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G25540 PPE_005G18550 | 2 | |
Anchor point | N/A | PPE_003G25540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G25540 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_003G25540 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29822G00940 RC30147G06870 | 2 | |
Anchor point | N/A | RC29822G00940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G06870 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29822G00940 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G113790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G113790 | 1 | ||
Tree-based ortholog | 1-to-1 | SL03G113790 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G027150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G027150 | 1 | ||
Tree-based ortholog | 1-to-1 | ST03G027150 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP5G30050 TP7G01970 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G30050 | 1 | ||
Tree-based ortholog | 1-to-1 | TP7G01970 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV14G12620 VV17G02400 | 2 | |
Anchor point | N/A | VV14G12620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G12620 | 1 | ||
Tree-based ortholog | 1-to-1 | VV14G12620 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G06680 ZM09G26280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G26280 | 1 | ||
Tree-based ortholog | 1-to-many | ZM01G06680 ZM09G26280 | 2 |