Integrative Orthology Viewer: TC0004G06860 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0004G06860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | TC0004G06860 | 1 | ||
Tree-based ortholog | TC0004G06860 TC0004G04720 TC0001G01510 ... | 5 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00055G01480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00055G01480 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00121G00230 ATR_00016G00670 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G14740 | 1 | |
Anchor point | N/A | AL6G14740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G14740 | 1 | ||
Tree-based ortholog | many-to-many | AL6G14740 AL8G34530 AL6G13730 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G14950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G14950 | 1 | ||
Tree-based ortholog | many-to-many | AT5G14950 AT5G66150 AT5G13980 | 3 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G06490 | 1 | |
Anchor point | N/A | BV2G06490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G06490 | 1 | ||
Tree-based ortholog | many-to-many | BV6G17230 BV2G06490 BV6G12640 ... | 5 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR02G07230 BR03G06140 | 2 | |
Anchor point | N/A | BR02G07230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G07230 | 1 | ||
Tree-based ortholog | many-to-many | BR03G06140 BR02G07230 BR09G07880 ... | 4 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G12810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G12810 | 1 | ||
Tree-based ortholog | many-to-many | CRU_006G12810 CRU_006G11880 CRU_008G27500 | 3 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP03592G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP03592G00010 | 1 | ||
Tree-based ortholog | many-to-many | CP00070G00710 CP00006G02690 CP42598G00010 ... | 5 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G12770 | 1 | |
Anchor point | N/A | CL10G12770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G12770 | 1 | ||
Tree-based ortholog | many-to-many | CL10G12770 CL01G20550 CL01G07660 | 3 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00028G00820 | 1 | |
Anchor point | N/A | CS00028G00820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00028G00820 | 1 | ||
Tree-based ortholog | many-to-many | CS00497G00080 CS00017G01330 CS00028G00820 ... | 5 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00011G08630 | 1 | |
Anchor point | N/A | CM00011G08630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G08630 | 1 | ||
Tree-based ortholog | many-to-many | CM00005G00480 CM00011G08630 | 2 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0010G18800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G18800 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G21280 EG0010G21250 EG0253G00010 ... | 11 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G37970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G37970 | 1 | ||
Tree-based ortholog | many-to-many | FV0G08880 FV1G13410 FV6G51880 ... | 5 | ||
Glycine max | Orthologous gene family | 1-to-many | GM13G04761 GM19G01890 | 2 | |
Anchor point | N/A | GM13G04761 GM19G01890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G04761 GM19G01890 | 2 | ||
Tree-based ortholog | many-to-many | GM16G05240 GM01G36980 GM02G05240 ... | 9 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR01G25860 GR06G02750 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G25860 | 1 | ||
Tree-based ortholog | many-to-many | GR06G02750 GR01G25860 GR03G11660 ... | 7 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G016200 | 1 | |
Anchor point | N/A | LJ2G016200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G016200 | 1 | ||
Tree-based ortholog | many-to-many | LJ2G016200 LJ1G052460 LJ1G052420 | 3 | ||
Malus domestica | Orthologous gene family | 1-to-1 | MD17G003170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G003170 | 1 | ||
Tree-based ortholog | many-to-many | MD17G003170 MD00G233860 MD09G000330 ... | 9 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME02793G00040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02793G00040 | 1 | ||
Tree-based ortholog | many-to-many | ME06916G01140 ME01701G00710 ME02688G00090 ... | 6 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT4G071680 MT6G008850 | 2 | |
Anchor point | N/A | MT6G008850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT4G071680 MT6G008850 | 2 | ||
Tree-based ortholog | many-to-many | MT6G008850 MT7G084030 MT3G098650 ... | 6 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G13650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G13650 | 1 | ||
Tree-based ortholog | many-to-many | OS10G05069 OS11G32260 | 2 | ||
Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00010G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00010G00170 | 1 | ||
Tree-based ortholog | many-to-many | PP00077G00590 PP00129G00420 | 2 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G35040 PT08G11740 PT17G07390 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G35040 PT17G07390 | 2 | ||
Tree-based ortholog | many-to-many | PT14G14360 PT02G23820 PT07G05630 ... | 6 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G25530 | 1 | |
Anchor point | N/A | PPE_003G25530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G25530 | 1 | ||
Tree-based ortholog | many-to-many | PPE_003G29000 PPE_007G19120 PPE_005G15000 ... | 5 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29822G00950 | 1 | |
Anchor point | N/A | RC29822G00950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29822G00950 | 1 | ||
Tree-based ortholog | many-to-many | RC30131G01210 RC29822G00950 RC29868G00050 ... | 4 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G087290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G087290 | 1 | ||
Tree-based ortholog | many-to-many | SL06G068860 SL02G087290 SL02G083700 | 3 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G035560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G035560 | 1 | ||
Tree-based ortholog | many-to-many | ST02G035560 ST06G026070 ST02G027020 | 3 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G29100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G29100 | 1 | ||
Tree-based ortholog | many-to-many | TP2G30540 TP6G29100 TP6G30020 | 3 | ||
Vitis vinifera | Anchor point | N/A | VV14G12610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G12610 | 1 | ||
Tree-based ortholog | many-to-many | VV17G06420 VV14G12610 VV14G13700 ... | 6 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM06G16990 ZM09G00330 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G16990 ZM09G00330 | 2 | ||
Tree-based ortholog | many-to-many | ZM01G24060 ZM01G23950 ZM01G23940 ... | 4 |