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Integrative Orthology Viewer:
TC0004G04110
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0002G19410 TC0004G04110 | 2 |  |
| Anchor point | TC0002G19410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0004G04110 | 1 | ||
| Tree-based ortholog | TC0004G04110 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00153G00510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00153G00510 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00153G00510 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G12860 AL6G13740 | 2 | |
| Anchor point | 1-to-1 | AL6G13740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G13740 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL6G13740 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G13150 AT5G13990 | 2 | |
| Anchor point | 1-to-1 | AT5G13990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G13990 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G13990 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV6G11000 BV6G11020 | 2 | |
| Anchor point | 1-to-1 | BV6G11000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G11020 | 1 | ||
| Tree-based ortholog | 1-to-many | BV6G11000 BV6G11020 | 2 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G06700 BR03G05220 BR03G05670 ... | 5 | |
| Anchor point | 1-to-1 | BR03G05670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G05670 | 1 | ||
| Tree-based ortholog | 1-to-many | BR10G20550 BR03G05670 BR02G06700 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_006G11000 CRU_006G11890 | 2 | |
| Anchor point | 1-to-1 | CRU_006G11890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G11890 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_006G11890 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00070G00480 CP00070G01130 | 2 | |
| Anchor point | 1-to-1 | CP00070G01130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00070G01130 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00070G01130 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G00900 | 1 | |
| Tree-based ortholog | 1-to-1 | CR10G00900 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G15290 CL07G17960 | 2 | |
| Anchor point | 1-to-1 | CL07G17960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G15290 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL01G15290 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00003G05240 CS00038G00120 | 2 | |
| Anchor point | 1-to-many | CS00038G00120 CS00003G05240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00038G00120 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00038G00120 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00031G02210 CM00074G00410 | 2 | |
| Anchor point | 1-to-1 | CM00031G02210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00074G00410 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00074G00410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G29410 EG0008G27200 | 2 | |
| Anchor point | 1-to-many | EG0002G29410 EG0008G27200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G27200 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0008G27200 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G13490 FV6G51430 | 2 | |
| Anchor point | 1-to-many | FV6G51430 FV0G13490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G51430 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G51430 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G07220 GM10G44570 GM16G05710 ... | 5 | |
| Anchor point | 1-to-many | GM16G05710 GM19G26830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G07220 | 1 | ||
| Tree-based ortholog | 1-to-many | GM16G05710 GM19G26830 GM02G07220 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G14180 GR06G04460 GR11G08790 ... | 5 | |
| Anchor point | 1-to-many | GR12G08380 GR11G08790 GR06G04460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G04460 | 1 | ||
| Tree-based ortholog | 1-to-many | GR12G08380 GR11G08790 GR06G04460 | 3 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G051480 | 1 | |
| Anchor point | 1-to-1 | LJ1G051480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G051480 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G051480 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G112160 MD00G476980 MD13G009600 ... | 5 | |
| Anchor point | 1-to-many | MD16G007730 MD13G009600 MD17G000490 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G476980 MD17G000490 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G112160 MD17G000490 MD00G476980 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03040G00090 ME03219G00300 ME06711G00470 ... | 4 | |
| Anchor point | 1-to-many | ME06711G00470 ME09231G00060 ME03219G00300 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09231G00060 | 1 | ||
| Tree-based ortholog | 1-to-many | ME09231G00060 ME03040G00090 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G117090 MT6G033310 MT7G026630 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G033310 | 1 | ||
| Tree-based ortholog | 1-to-many | MT7G026630 MT6G033310 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G06700 OS12G06840 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G06700 | 1 | ||
| Tree-based ortholog | 1-to-many | OS12G06840 OS11G06700 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00169G00210 PP00070G00130 PP00177G00690 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00177G00690 PP00169G00210 PP00376G00390 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G06070 PT01G32560 PT17G06800 | 3 | |
| Anchor point | 1-to-many | PT01G32560 PT17G06800 PT01G06070 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G32560 PT17G06800 | 2 | ||
| Tree-based ortholog | 1-to-many | PT01G32560 PT17G06800 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G23010 PPE_003G28650 | 2 | |
| Anchor point | 1-to-many | PPE_003G28650 PPE_001G23010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G28650 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_003G28650 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29808G00120 RC29929G01020 | 2 | |
| Anchor point | 1-to-1 | RC29929G01020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29808G00120 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29808G00120 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G009880 SL02G094370 SL05G024340 | 3 | |
| Anchor point | 1-to-many | SL02G094370 SL01G009880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G094370 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL02G094370 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G037570 ST05G020420 | 2 | |
| Anchor point | 1-to-many | ST05G020420 ST02G037570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G037570 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST02G037570 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP6G30010 TP6G30830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G30010 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP6G30010 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G00760 | 1 | |
| Anchor point | 1-to-1 | VV01G00760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G00960 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV01G00760 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G23900 ZM03G19530 ZM04G34840 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G19530 ZM10G02550 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM10G02550 ZM03G19530 ZM04G34840 ... | 4 |