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Integrative Orthology Viewer:
TC0003G29270
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0003G29270 | 1 |  |
| Anchor point | TC0001G34090 TC0003G19600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0003G29270 | 1 | ||
| Tree-based ortholog | TC0003G29270 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00101G00920 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00101G00920 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G32610 | 1 | |
| Tree-based ortholog | 1-to-1 | AL8G17700 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G53110 | 1 | |
| Tree-based ortholog | 1-to-many | AT2G46160 AT5G07040 AT2G46493 ... | 9 | ||
| Beta vulgaris | Anchor point | many-to-many | BV5G05990 BV3G02310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05990 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV3G02310 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G16020 | 1 | |
| Tree-based ortholog | 1-to-many | BR04G27550 BR03G17730 BR04G21380 ... | 11 | ||
| Capsella rubella | Anchor point | many-to-1 | CRU_008G13010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G13010 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_005G26830 CRU_006G05870 CRU_001G25410 ... | 6 | ||
| Carica papaya | Anchor point | many-to-many | CP00096G00080 CP00003G00660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00660 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00011G00600 CP00096G00080 CP00012G00980 ... | 4 | ||
| Citrullus lanatus | Anchor point | many-to-1 | CL07G18270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G18270 | 1 | ||
| Tree-based ortholog | 1-to-many | CL08G10420 CL05G01040 | 2 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00328G00120 | 1 | |
| Tree-based ortholog | 1-to-many | CS11317G00010 CS07771G00010 CS00008G00080 ... | 4 | ||
| Cucumis melo | Anchor point | many-to-1 | CM00027G02370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G02370 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00014G07610 CM00006G01050 CM00008G04350 ... | 4 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G13930 | 1 | |
| Anchor point | many-to-many | EG0004G13920 EG0005G07330 EG0005G00500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G07370 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0004G17250 EG0001G12050 EG0004G13920 | 3 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV5G05190 FV5G05200 FV5G05210 ... | 4 | |
| Anchor point | many-to-1 | FV5G05180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G05260 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV5G05220 | 1 | ||
| Glycine max | Anchor point | many-to-many | GM07G06201 GM06G13270 GM05G36870 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G36870 GM08G02670 | 2 | ||
| Tree-based ortholog | 1-to-many | GM11G03870 GM01G41560 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR03G07930 GR04G13350 | 2 | |
| Anchor point | many-to-many | GR04G13340 GR08G25430 GR03G07930 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G13350 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR04G13350 | 1 | ||
| Lotus japonicus | Anchor point | many-to-many | LJ1G013610 LJ4G046850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G046850 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ2G034140 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD02G016970 MD16G001740 | 2 | |
| Anchor point | many-to-many | MD06G010100 MD02G016970 MD07G012730 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G019940 MD01G021740 MD00G464410 | 3 | ||
| Tree-based ortholog | 1-to-many | MD02G016970 MD00G478530 MD06G006450 | 3 | ||
| Manihot esculenta | Anchor point | many-to-many | ME06089G00100 ME03175G00260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03175G00260 ME10599G00010 | 2 | ||
| Tree-based ortholog | 1-to-many | ME11581G00880 ME10888G00010 ME12144G00030 | 3 | ||
| Medicago truncatula | Anchor point | many-to-many | MT3G091200 MT5G009190 MT8G027745 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G099515 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT1G026960 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G53500 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00041G01300 PP00014G00810 | 2 | |
| Populus trichocarpa | Anchor point | many-to-many | PT03G13990 PT01G09170 PT15G01780 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G09170 PT03G13990 | 2 | ||
| Tree-based ortholog | 1-to-many | PT12G01140 PT12G01150 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_005G12700 PPE_005G12710 PPE_005G12740 ... | 8 | |
| Anchor point | many-to-many | PPE_002G29880 PPE_002G18080 PPE_005G12700 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_005G12800 PPE_005G12770 PPE_005G12760 ... | 5 | ||
| Tree-based ortholog | 1-to-many | PPE_002G08690 PPE_005G06890 PPE_002G08810 | 3 | ||
| Ricinus communis | Anchor point | many-to-many | RC30169G02740 RC30190G05430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G05430 | 1 | ||
| Tree-based ortholog | 1-to-many | RC27401G00110 RC30169G02800 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL01G095810 SL08G082310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G082310 | 1 | ||
| Tree-based ortholog | 1-to-many | SL10G081790 SL01G006910 SL01G096650 ... | 9 | ||
| Solanum tuberosum | Anchor point | many-to-many | ST03G013410 ST08G028060 ST01G033250 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G028060 | 1 | ||
| Tree-based ortholog | 1-to-many | ST10G026320 ST01G034150 ST01G033250 ... | 7 | ||
| Thellungiella parvula | Anchor point | many-to-1 | TP6G15280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G15280 | 1 | ||
| Tree-based ortholog | 1-to-many | TP5G01860 TP4G28220 TP4G18160 ... | 9 | ||
| Vitis vinifera | Anchor point | many-to-many | VV02G04580 VV16G00040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G10410 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV16G00040 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G55480 ZM05G02940 | 2 | |