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Integrative Orthology Viewer:
TC0003G28530
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0003G28530 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0003G28530 | 1 | ||
| Tree-based ortholog | TC0003G28530 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_CG00770 | 1 | |
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G33720 | 1 | |
| Anchor point | N/A | AL6G33720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G33720 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL6G33720 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G11175 | 1 | |
| Anchor point | N/A | AT4G11175 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G11175 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT4G11175 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR08G10170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G10170 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR00G11500 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G28910 | 1 | |
| Anchor point | N/A | CRU_006G28910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G28910 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_006G28910 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00321G00050 | 1 | |
| Anchor point | N/A | CP00321G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00321G00050 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00321G00050 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR04G02580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR04G02580 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR04G02580 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G12040 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G12040 | 1 | ||
| Citrus sinensis | Anchor point | N/A | CS00009G01720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G01720 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00009G01720 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CMCG00780 CM00006G09370 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00029G00750 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G02080 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G02080 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G41190 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G41190 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G00260 GM17G08790 | 2 | |
| Tree-based ortholog | 1-to-many | GM05G00260 GM17G08790 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G25130 | 1 | |
| Anchor point | N/A | GR08G25130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G25130 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR08G25130 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD11G022090 | 1 | |
| Tree-based ortholog | 1-to-1 | MD11G022090 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06914G01590 ME02538G00380 | 2 | |
| Tree-based ortholog | 1-to-many | ME02538G00380 ME06914G01590 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G061130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G061130 | 1 | ||
| Tree-based ortholog | 1-to-many | MT8G061130 MT00G15640 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OSCG00860 OS01G57954 OS05G22716 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS01G57954 OS04G16834 OSCG00860 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPCG00870 | 1 | |
| Tree-based ortholog | 1-to-1 | PPCG00870 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G24110 PT18G03890 | 2 | |
| Tree-based ortholog | 1-to-many | PT06G24110 PT18G03890 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G17500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G17490 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_004G17490 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G098350 | 1 | |
| Tree-based ortholog | 1-to-1 | SL12G098350 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G030080 | 1 | |
| Tree-based ortholog | 1-to-1 | ST12G030080 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G06240 | 1 | |
| Anchor point | N/A | TP6G06240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G06240 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP6G06240 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VVMG01460 VVCG00820 | 2 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZMCG00780 ZMCG00260 | 2 | |
| Tree-based ortholog | 1-to-many | ZMCG00260 ZMCG00780 ZM10G13980 | 3 |