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Integrative Orthology Viewer:
TC0003G26380
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0003G26380 | 1 |  |
| Anchor point | TC0001G36800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0003G26380 TC0003G26390 | 2 | ||
| Tree-based ortholog | TC0003G26390 TC0003G26400 TC0003G26380 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00109G00440 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00001G04290 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-1 | AL1G12920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G33540 | 1 | ||
| Tree-based ortholog | many-to-many | AL2G15360 AL0G10180 AL4G33540 | 3 | ||
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT1G12550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G45630 | 1 | ||
| Tree-based ortholog | many-to-1 | AT2G45630 | 1 | ||
| Beta vulgaris | Anchor point | 1-to-1 | BV5G08430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G08430 | 1 | ||
| Tree-based ortholog | many-to-1 | BV5G08430 | 1 | ||
| Brassica rapa | Anchor point | 1-to-1 | BR06G08410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G08410 | 1 | ||
| Tree-based ortholog | many-to-many | BR06G08410 BR09G49590 BR09G49600 | 3 | ||
| Capsella rubella | Anchor point | 1-to-1 | CRU_001G11620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G11620 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_004G27260 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00046G01970 | 1 | |
| Tree-based ortholog | many-to-1 | CP00012G02480 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G02730 | 1 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CL05G02290 CL05G02310 CL05G02280 ... | 4 | |
| Tree-based ortholog | many-to-many | CL05G02290 CL05G02280 CL05G02270 ... | 5 | ||
| Citrus sinensis | Anchor point | 1-to-many | CS00001G02130 CS00040G00550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G02130 | 1 | ||
| Tree-based ortholog | many-to-many | CS00040G00560 CS00040G00550 | 2 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G02480 | 1 | |
| Tree-based ortholog | many-to-many | CM00006G02480 CM00006G02470 CM00006G02490 ... | 4 | ||
| Eucalyptus grandis | Anchor point | 1-to-1 | EG0004G15810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G15810 | 1 | ||
| Tree-based ortholog | many-to-many | EG0004G15820 EG0004G15810 | 2 | ||
| Fragaria vesca | Anchor point | 1-to-1 | FV7G10230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV7G10240 FV7G10230 | 2 | ||
| Tree-based ortholog | many-to-many | FV7G10250 FV7G10230 FV7G10240 ... | 4 | ||
| Glycine max | Anchor point | 1-to-many | GM03G02271 GM07G08961 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM07G08985 | 1 | ||
| Tree-based ortholog | many-to-many | GM07G08985 GM03G02271 GM07G08961 ... | 5 | ||
| Gossypium raimondii | Anchor point | 1-to-many | GR08G24200 GR03G16420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR03G16440 GR03G16450 GR03G16420 | 3 | ||
| Tree-based ortholog | many-to-many | GR03G16450 GR03G16430 GR03G16420 ... | 5 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G038180 | 1 | |
| Tree-based ortholog | many-to-many | LJ3G038180 LJ3G038200 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD07G009740 MD07G009440 | 2 | |
| Tree-based ortholog | many-to-many | MD07G009440 MD07G009750 MD07G009740 | 3 | ||
| Manihot esculenta | Anchor point | 1-to-many | ME07035G00570 ME03942G00210 ME07088G00150 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07088G00150 | 1 | ||
| Tree-based ortholog | many-to-many | ME07088G00150 ME07035G00570 | 2 | ||
| Medicago truncatula | Anchor point | 1-to-1 | MT8G033390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT8G033400 MT8G033410 | 2 | ||
| Tree-based ortholog | many-to-many | MT8G033390 MT8G033400 MT8G033410 ... | 4 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G01674 | 1 | |
| Tree-based ortholog | many-to-many | OS04G01674 OS07G40660 OS08G34570 ... | 6 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G01810 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00001G02330 PP00133G00410 | 2 | |
| Tree-based ortholog | many-to-many | PP00001G02330 PP00133G00410 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT01G11320 PT02G15110 PT03G11900 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT03G11900 | 1 | ||
| Tree-based ortholog | many-to-many | PT01G11320 PT01G11330 PT03G11900 | 3 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_002G14780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_002G14810 PPE_002G14790 PPE_002G14960 ... | 4 | ||
| Tree-based ortholog | many-to-many | PPE_002G14780 PPE_002G14810 PPE_002G14790 ... | 8 | ||
| Ricinus communis | Anchor point | 1-to-many | RC30190G02540 RC30174G01800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30190G02540 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30190G02540 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL08G080030 SL01G093990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G093990 | 1 | ||
| Tree-based ortholog | many-to-1 | SL08G080030 | 1 | ||
| Solanum tuberosum | Anchor point | 1-to-many | ST08G026060 ST01G031220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST08G026060 ST08G026070 | 2 | ||
| Tree-based ortholog | many-to-many | ST08G026070 ST08G026060 | 2 | ||
| Thellungiella parvula | Anchor point | 1-to-1 | TP1G11130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G11130 | 1 | ||
| Tree-based ortholog | many-to-many | TP1G11130 TP1G11140 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV02G07550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G08490 | 1 | ||
| Tree-based ortholog | many-to-many | VV02G07550 VV02G07560 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G01630 | 1 | |
| Tree-based ortholog | many-to-many | ZM07G01630 ZM10G13060 ZM10G13020 ... | 7 |