Integrative Orthology Viewer: TC0003G00580 (Theobroma cacao) top


Inparalogs

Organism Source Genes #genes Details
Theobroma cacaoOrthologous gene familyTC0001G17630 TC0002G11360 TC0002G24290 ...7
Anchor pointTC0002G24290 1
Best-Hits-and-Inparalogs(BHI)familyTC0003G00580 1
Tree-based orthologTC0003G00580 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR_00033G02630 ATR_00065G01060 ATR_00088G00630 ...5
Anchor point1-to-1ATR_00088G00630 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR_00088G00630 1
Tree-based ortholog1-to-1ATR_00088G00630 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G10500 AL1G44320 AL2G06040 ...10
Anchor point1-to-1AL2G06040 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AL8G29410 1
Tree-based ortholog1-to-manyAL8G13890 AL8G29410 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G10540 AT1G49960 AT1G60030 ...10
Anchor point1-to-1AT1G60030 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AT5G62890 1
Tree-based ortholog1-to-manyAT5G49990 AT5G62890 2
Beta vulgarisOrthologous gene familymany-to-manyBV1G01680 BV5G02390 BV6G10400 ...6
Anchor point1-to-manyBV5G02390 BV6G10400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1BV5G02390 1
Tree-based ortholog1-to-1BV5G02390 1
Brassica rapaOrthologous gene familymany-to-manyBR01G25030 BR02G38990 BR03G23910 ...11
Anchor point1-to-1BR02G38990 1
Best-Hits-and-Inparalogs(BHI)family1-to-1BR09G06140 1
Tree-based ortholog1-to-manyBR10G00200 BR06G29410 BR09G06140 ...4
Capsella rubellaOrthologous gene familymany-to-manyCRU_001G09530 CRU_001G37220 CRU_002G04950 ...9
Anchor point1-to-1CRU_002G04950 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CRU_008G22960 1
Tree-based ortholog1-to-manyCRU_008G09720 CRU_008G22960 2
Carica papayaOrthologous gene familymany-to-manyCP00005G03510 CP00007G00860 CP00007G01320 ...7
Anchor point1-to-1CP00110G00250 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CP00110G00250 1
Tree-based ortholog1-to-1CP00110G00250 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1CR17G04620 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CR17G04620 1
Tree-based ortholog1-to-1CR17G04620 1
Citrullus lanatusOrthologous gene familymany-to-manyCL02G18230 CL03G07340 CL05G20690 ...6
Anchor point1-to-1CL06G17360 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CL06G17360 1
Tree-based ortholog1-to-1CL06G17360 1
Citrus sinensisOrthologous gene familymany-to-manyCS00002G03460 CS00003G03010 CS00007G01230 ...6
Anchor point1-to-manyCS00003G03010 CS00020G01790 2
Best-Hits-and-Inparalogs(BHI)family1-to-1CS00020G01790 1
Tree-based ortholog1-to-1CS00020G01790 1
Cucumis meloOrthologous gene familymany-to-manyCM00001G07830 CM00016G03370 CM00029G00980 ...6
Anchor point1-to-manyCM00030G00340 CM00016G03370 2
Best-Hits-and-Inparalogs(BHI)family1-to-1CM00030G00340 1
Tree-based ortholog1-to-1CM00030G00340 1
Eucalyptus grandisOrthologous gene familymany-to-manyEG0002G02920 EG0002G20670 EG0004G03770 ...7
Anchor point1-to-manyEG0002G20670 EG0002G02920 EG0011G24100 3
Best-Hits-and-Inparalogs(BHI)family1-to-1EG0002G02920 1
Tree-based ortholog1-to-manyEG0002G02920 EG0011G24100 2
Fragaria vescaOrthologous gene familymany-to-manyFV2G04800 FV2G31770 FV2G51970 ...7
Anchor point1-to-manyFV4G22200 FV5G17520 2
Best-Hits-and-Inparalogs(BHI)family1-to-1FV5G17520 1
Tree-based ortholog1-to-1FV5G17520 1
Glycine maxOrthologous gene familymany-to-manyGM01G04160 GM02G03550 GM02G43660 ...23
Anchor point1-to-manyGM06G19660 GM01G04160 GM05G01900 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-manyGM06G19660 GM04G35080 2
Tree-based ortholog1-to-manyGM06G19660 GM04G35080 GM05G01900 ...4
Gossypium raimondiiOrthologous gene familymany-to-manyGR01G09550 GR03G10990 GR05G23060 ...12
Anchor point1-to-manyGR08G29750 GR05G18530 2
Best-Hits-and-Inparalogs(BHI)family1-to-1GR03G10990 1
Tree-based ortholog1-to-1GR03G10990 1
Lotus japonicusOrthologous gene familymany-to-manyLJ1G006250 LJ4G041750 LJ6G025670 3
Anchor point1-to-1LJ1G006250 1
Best-Hits-and-Inparalogs(BHI)family1-to-1LJ1G006250 1
Tree-based ortholog1-to-1LJ1G006250 1
Malus domesticaOrthologous gene familymany-to-manyMD00G359700 MD00G515410 MD01G019560 ...7
Anchor point1-to-manyMD16G004810 MD13G006060 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MD13G006060 1
Tree-based ortholog1-to-manyMD16G004810 MD13G006060 2
Manihot esculentaOrthologous gene familymany-to-manyME03104G00060 ME03237G00160 ME03667G00050 ...12
Anchor point1-to-manyME11495G01280 ME04083G00400 ME06011G00190 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyME04083G00400 ME12794G01270 2
Tree-based ortholog1-to-manyME04083G00400 ME12794G01270 2
Medicago truncatulaOrthologous gene familymany-to-manyMT1G021120 MT1G106085 MT2G016460 ...11
Anchor point1-to-manyMT4G106750 MT3G078270 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MT3G078270 1
Tree-based ortholog1-to-manyMT3G078270 MT4G106750 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyOS01G55500 OS02G50820 OS03G48810 ...9
Anchor point1-to-1OS02G50820 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyOS08G32500 OS02G50820 OS03G60880 3
Tree-based ortholog1-to-manyOS08G32500 OS09G21340 OS02G50820 ...4
Physcomitrella patensOrthologous gene familymany-to-manyPP00088G00900 PP00144G00360 PP00144G00370 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1PP00088G00900 1
Tree-based ortholog1-to-manyPP00144G00390 PP00144G00360 PP00144G00370 ...6
Populus trichocarpaOrthologous gene familymany-to-manyPT02G12940 PT04G05880 PT08G14640 ...11
Anchor point1-to-manyPT10G09550 PT15G07260 PT12G07740 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1PT15G07260 1
Tree-based ortholog1-to-manyPT15G07260 PT12G07740 2
Prunus persicaOrthologous gene familymany-to-manyPPE_001G27010 PPE_001G39650 PPE_001G42590 ...6
Anchor point1-to-manyPPE_005G18350 PPE_001G27010 2
Best-Hits-and-Inparalogs(BHI)family1-to-1PPE_005G18350 1
Tree-based ortholog1-to-1PPE_005G18350 1
Ricinus communisOrthologous gene familymany-to-manyRC29168G00190 RC29948G00220 RC30026G00060 ...6
Anchor point1-to-1RC30147G06690 1
Best-Hits-and-Inparalogs(BHI)family1-to-1RC30147G06690 1
Tree-based ortholog1-to-1RC30147G06690 1
Solanum lycopersicumOrthologous gene familymany-to-manySL01G106920 SL02G072500 SL03G114030 ...10
Anchor point1-to-manySL03G114030 SL06G071330 SL05G006020 3
Best-Hits-and-Inparalogs(BHI)family1-to-1SL12G026430 1
Tree-based ortholog1-to-manySL06G071330 SL03G114030 SL12G026430 3
Solanum tuberosumOrthologous gene familymany-to-manyST01G044150 ST02G019150 ST03G027390 ...10
Anchor point1-to-manyST05G012530 ST03G027390 2
Best-Hits-and-Inparalogs(BHI)family1-to-1ST12G017850 1
Tree-based ortholog1-to-manyST06G027380 ST03G027390 ST12G017850 3
Thellungiella parvulaOrthologous gene familymany-to-manyTP1G09190 TP1G36810 TP2G04560 ...9
Anchor point1-to-1TP2G04560 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TP2G26030 1
Tree-based ortholog1-to-manyTP6G11820 TP2G26030 2
Vitis viniferaOrthologous gene familymany-to-manyVV01G13390 VV03G09680 VV10G02330 ...7
Anchor point1-to-manyVV01G13390 VV17G02210 2
Best-Hits-and-Inparalogs(BHI)family1-to-1VV17G02210 1
Tree-based ortholog1-to-1VV17G02210 1
Zea maysOrthologous gene familymany-to-manyZM01G27970 ZM01G39210 ZM01G49390 ...9
Anchor point1-to-1ZM05G39960 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ZM07G13110 1
Tree-based ortholog1-to-manyZM01G39210 ZM07G13110 ZM05G39960 ...6
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