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Integrative Orthology Viewer:
TC0002G06480
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0002G06480 | 1 |  |
| Anchor point | TC0008G04270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0002G06480 | 1 | ||
| Tree-based ortholog | TC0002G06480 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00017G00030 ATR_00041G02710 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00041G02710 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00017G00030 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL2G24660 AL4G00300 AL7G00650 | 3 | |
| Anchor point | 1-to-many | AL1G21020 AL2G24660 AL7G00650 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G00300 | 1 | ||
| Tree-based ortholog | 1-to-many | AL4G00300 AL7G00650 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G75760 AT2G21190 AT4G38790 | 3 | |
| Anchor point | 1-to-many | AT2G21190 AT1G19970 AT4G38790 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G21190 | 1 | ||
| Tree-based ortholog | 1-to-many | AT2G21190 AT4G38790 | 2 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G02900 | 1 | |
| Anchor point | 1-to-many | BV0G61870 BV9G02900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G02900 | 1 | ||
| Tree-based ortholog | 1-to-many | BV0G61870 BV9G02900 | 2 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR07G19830 BR07G30990 BR08G20250 ... | 4 | |
| Anchor point | 1-to-many | BR08G20250 BR09G44780 BR06G14430 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G20250 | 1 | ||
| Tree-based ortholog | 1-to-many | BR08G20250 BR09G44780 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_002G21320 CRU_004G00220 CRU_007G00620 | 3 | |
| Anchor point | 1-to-many | CRU_001G18680 CRU_002G21320 CRU_007G00620 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G00220 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_007G00620 CRU_004G00220 | 2 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00026G00420 | 1 | |
| Anchor point | 1-to-many | CP00026G00420 CP00037G01940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G00420 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00037G01940 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR13G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G00170 | 1 | ||
| Tree-based ortholog | 1-to-many | CR13G00170 CR01G11050 CR06G15360 | 3 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G19350 | 1 | |
| Anchor point | 1-to-many | CL05G19350 CL02G11750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G19350 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL02G11750 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00450G00080 | 1 | |
| Anchor point | 1-to-many | CS00002G05520 CS00450G00080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00450G00080 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00450G00080 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00045G00580 CM01596G04710 | 2 | |
| Anchor point | 1-to-1 | CM00045G00580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00045G00580 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00045G00580 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0006G13490 EG0009G11090 | 2 | |
| Anchor point | 1-to-many | EG0009G11090 EG0006G13490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G11090 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0009G11090 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G38590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G38590 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV2G38590 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G00760 GM06G00781 GM11G10390 ... | 4 | |
| Anchor point | 1-to-many | GM12G02680 GM11G10390 GM06G02680 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G02680 GM11G10390 | 2 | ||
| Tree-based ortholog | 1-to-many | GM11G10390 GM12G02680 GM04G00760 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G19260 GR05G25200 GR08G03340 | 3 | |
| Anchor point | 1-to-many | GR08G03340 GR02G19260 GR05G25200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G03340 | 1 | ||
| Tree-based ortholog | 1-to-many | GR05G25200 GR08G03340 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G042670 | 1 | |
| Anchor point | 1-to-1 | LJ1G042670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G042670 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G042670 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G298160 MD05G019870 | 2 | |
| Anchor point | 1-to-1 | MD05G019870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G019870 MD00G298160 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G298160 MD05G019870 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03188G00030 ME03252G00200 | 2 | |
| Anchor point | 1-to-many | ME07012G00520 ME03252G00200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03188G00030 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME03188G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G075550 | 1 | |
| Anchor point | 1-to-1 | MT4G075550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G075550 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT4G075550 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS08G43470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G43470 | 1 | ||
| Tree-based ortholog | 1-to-many | OS08G43470 OS09G36370 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00400 | 1 | |
| Tree-based ortholog | 1-to-many | OL05G00400 OL02G02570 OL02G02580 | 3 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00195G00300 PP00280G00260 PP00442G00110 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00280G00260 PP00442G00110 PP00195G00300 | 3 | ||
| Tree-based ortholog | 1-to-many | PP00195G00300 PP00442G00110 PP00280G00260 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G00020 PT02G02230 PT04G16740 ... | 4 | |
| Anchor point | 1-to-many | PT04G16740 PT02G02230 PT09G12890 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G16740 PT09G12890 | 2 | ||
| Tree-based ortholog | 1-to-many | PT04G16740 PT09G12890 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G17740 | 1 | |
| Anchor point | 1-to-1 | PPE_008G17740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G17740 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_008G17740 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29711G00130 | 1 | |
| Anchor point | 1-to-many | RC29711G00130 RC30170G05410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29711G00130 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29711G00130 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL01G111090 SL10G054850 | 2 | |
| Anchor point | 1-to-many | SL10G054850 SL01G111090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G111090 | 1 | ||
| Tree-based ortholog | 1-to-many | SL01G111090 SL10G054850 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G048500 | 1 | |
| Anchor point | 1-to-1 | ST01G048500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G048500 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST01G048500 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP4G00350 TP5G30870 TP7G37030 | 3 | |
| Anchor point | 1-to-many | TP7G37030 TP1G17760 TP4G00350 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G00350 | 1 | ||
| Tree-based ortholog | 1-to-many | TP7G37030 TP4G00350 | 2 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV18G10560 | 1 | |
| Anchor point | 1-to-many | VV18G10560 VV03G05380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G10560 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV03G05380 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G37030 ZM02G34160 ZM04G34990 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G34990 ZM01G37030 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM07G20500 ZM02G34160 ZM01G37030 ... | 4 |