Integrative Orthology Viewer: TC0001G22140 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0001G22140 | 1 | |
Anchor point | TC0004G20990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | TC0001G22140 | 1 | ||
Tree-based ortholog | TC0002G09450 TC0001G05140 TC0001G22140 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Anchor point | 1-to-1 | ATR_00067G01720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00067G01720 ATR_01954G00010 | 2 | ||
Tree-based ortholog | many-to-1 | ATR_00126G00330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G11990 | 1 | |
Anchor point | 1-to-many | AL3G28500 AL8G11990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G11990 | 1 | ||
Tree-based ortholog | many-to-many | AL3G28500 AL1G43900 AL3G20680 ... | 4 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G48820 | 1 | |
Anchor point | 1-to-many | AT5G48820 AT3G24810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G48820 | 1 | ||
Tree-based ortholog | many-to-many | AT3G24810 AT1G49620 AT3G19150 ... | 4 | ||
Beta vulgaris | Anchor point | 1-to-1 | BV7G14680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14680 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G03660 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR06G30970 BR09G04730 | 2 | |
Anchor point | 1-to-many | BR03G38140 BR03G16300 BR09G04730 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G04730 | 1 | ||
Tree-based ortholog | many-to-many | BR03G38140 BR03G35810 BR09G43730 | 3 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G08440 | 1 | |
Anchor point | 1-to-many | CRU_003G24200 CRU_008G08440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08440 | 1 | ||
Tree-based ortholog | many-to-many | CRU_003G24200 CRU_001G36910 CRU_003G18100 ... | 4 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00008G01520 | 1 | |
Anchor point | 1-to-1 | CP00008G01520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G01520 | 1 | ||
Tree-based ortholog | many-to-many | CP00062G00280 CP00055G01660 | 2 | ||
Citrullus lanatus | Anchor point | 1-to-many | CL07G00420 CL05G03680 CL06G07570 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07570 | 1 | ||
Tree-based ortholog | many-to-1 | CL07G00420 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00029G00570 | 1 | |
Anchor point | 1-to-1 | CS00029G00570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00029G00570 | 1 | ||
Tree-based ortholog | many-to-many | CS00598G00070 CS00006G02260 | 2 | ||
Cucumis melo | Anchor point | 1-to-many | CM00043G01220 CM00046G00250 CM00006G04110 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G01220 | 1 | ||
Tree-based ortholog | many-to-many | CM00123G00050 CM00034G00450 | 2 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G17910 | 1 | |
Anchor point | 1-to-many | EG0011G17910 EG0008G00620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G00620 | 1 | ||
Tree-based ortholog | many-to-many | EG0008G16580 EG0007G10690 EG0011G17910 | 3 | ||
Fragaria vesca | Anchor point | 1-to-1 | FV2G15050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07920 | 1 | ||
Tree-based ortholog | many-to-many | FV3G33420 FV1G18530 | 2 | ||
Glycine max | Orthologous gene family | 1-to-many | GM08G46890 GM18G36820 | 2 | |
Anchor point | 1-to-many | GM18G36820 GM08G46890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G46890 GM18G36820 | 2 | ||
Tree-based ortholog | many-to-many | GM02G15100 GM07G33360 GM01G39220 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G22550 | 1 | |
Anchor point | 1-to-many | GR04G22550 GR06G22180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G22550 | 1 | ||
Tree-based ortholog | many-to-many | GR13G04260 GR05G23890 GR02G00740 ... | 6 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G024050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024050 | 1 | ||
Tree-based ortholog | many-to-1 | LJ4G012370 | 1 | ||
Malus domestica | Anchor point | 1-to-many | MD10G012320 MD09G015140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G015140 | 1 | ||
Tree-based ortholog | many-to-many | MD00G168270 MD00G061090 MD00G510880 ... | 6 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME08287G00150 | 1 | |
Anchor point | 1-to-many | ME08287G00150 ME03332G01420 ME02421G00440 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08287G00150 | 1 | ||
Tree-based ortholog | many-to-many | ME04393G00030 ME03175G00090 ME00319G00020 | 3 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT7G057920 MT7G058390 | 2 | |
Anchor point | 1-to-1 | MT7G057920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G058390 MT7G057920 | 2 | ||
Tree-based ortholog | many-to-1 | MT5G017600 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G04490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04490 | 1 | ||
Tree-based ortholog | many-to-1 | OS11G40030 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00148G00550 | 1 | |
Populus trichocarpa | Orthologous gene family | 1-to-1 | PT02G24210 | 1 | |
Anchor point | 1-to-many | PT17G05400 PT02G24210 PT01G31400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24210 | 1 | ||
Tree-based ortholog | many-to-many | PT09G10360 PT04G14210 PT07G04230 ... | 4 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_008G21860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G21860 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_001G00600 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC30204G00340 | 1 | |
Anchor point | 1-to-many | RC30204G00340 RC29904G00720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30204G00340 | 1 | ||
Tree-based ortholog | many-to-many | RC29801G01480 RC30115G00070 | 2 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G061280 | 1 | |
Anchor point | 1-to-many | SL09G061280 SL09G091780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G061280 | 1 | ||
Tree-based ortholog | many-to-many | SL01G108610 SL02G090680 SL03G044480 | 3 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G017820 | 1 | |
Anchor point | 1-to-many | ST09G017820 ST09G028290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G017820 | 1 | ||
Tree-based ortholog | many-to-many | ST01G045850 ST02G032160 | 2 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G19210 | 1 | |
Anchor point | 1-to-many | TP2G19210 TP3G22550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G19210 | 1 | ||
Tree-based ortholog | many-to-many | TP3G22550 TP1G36490 TP3G17220 | 3 | ||
Vitis vinifera | Anchor point | 1-to-many | VV05G07510 VV07G12880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12880 | 1 | ||
Tree-based ortholog | many-to-many | VV03G06910 VV07G05650 | 2 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G02910 ZM09G28210 | 2 | |
Tree-based ortholog | many-to-many | ZM04G02170 ZM09G01490 | 2 |