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Integrative Orthology Viewer:
TC0001G00700
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0001G00700 TC0008G05700 | 2 |  |
| Anchor point | TC0002G04390 TC0008G05700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0001G00700 | 1 | ||
| Tree-based ortholog | TC0001G00700 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00047G00640 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00047G00640 | 1 | ||
| Arabidopsis lyrata | Anchor point | many-to-many | AL3G38430 AL1G21680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G38430 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL3G38430 | 1 | ||
| Arabidopsis thaliana | Anchor point | many-to-many | AT2G17650 AT1G20560 AT1G76290 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G17650 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G17650 | 1 | ||
| Beta vulgaris | Anchor point | many-to-1 | BV6G01040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G01030 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G01030 | 1 | ||
| Brassica rapa | Anchor point | many-to-many | BR10G17060 BR06G14830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G17060 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR10G17060 | 1 | ||
| Capsella rubella | Anchor point | many-to-many | CRU_003G30520 CRU_002G21870 CRU_001G19220 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_003G30530 CRU_003G30520 | 2 | ||
| Tree-based ortholog | 1-to-many | CRU_003G30520 CRU_003G30530 CRU_003G30540 | 3 | ||
| Carica papaya | Anchor point | many-to-1 | CP00026G01910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00010G01790 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00010G01790 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G15830 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G15830 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G01810 | 1 | |
| Anchor point | many-to-many | CL10G01800 CL11G12580 CL01G21020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL01G21020 | 1 | ||
| Citrus sinensis | Anchor point | many-to-many | CS00002G06550 CS00017G02040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G02040 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00002G06550 CS00002G06560 | 2 | ||
| Cucumis melo | Anchor point | many-to-many | CM00007G10030 CM00029G04000 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G10030 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00007G10030 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0009G18870 EG0009G18890 EG0009G18910 ... | 5 | |
| Anchor point | many-to-many | EG0009G18840 EG0006G14400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G18840 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0009G18860 EG0009G19010 EG0009G18840 | 3 | ||
| Fragaria vesca | Anchor point | many-to-1 | FV1G12380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G12380 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV1G12380 | 1 | ||
| Glycine max | Anchor point | many-to-many | GM02G04790 GM11G08890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G04790 | 1 | ||
| Tree-based ortholog | 1-to-1 | GM02G04790 | 1 | ||
| Gossypium raimondii | Anchor point | many-to-1 | GR03G00330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G00330 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR03G00330 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G036950 | 1 | |
| Tree-based ortholog | 1-to-many | LJ2G036860 LJ2G036950 | 2 | ||
| Malus domestica | Anchor point | many-to-many | MD17G021360 MD15G017110 MD02G010530 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G017110 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD15G017110 | 1 | ||
| Manihot esculenta | Anchor point | many-to-1 | ME07520G03270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07520G03270 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME07520G03270 | 1 | ||
| Medicago truncatula | Anchor point | many-to-many | MT8G074040 MT5G023730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G074040 | 1 | ||
| Tree-based ortholog | 1-to-many | MT8G074040 MT8G074120 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04120 | 1 | |
| Tree-based ortholog | 1-to-many | OS01G24030 OS02G02700 OS03G04130 ... | 4 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G00160 | 1 | |
| Tree-based ortholog | 1-to-many | OL01G06260 OL10G01670 OL04G05140 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00007G01680 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00220G00210 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G01060 PT05G09950 PT05G25070 | 3 | |
| Anchor point | many-to-many | PT02G01060 PT07G05930 PT05G09950 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G09950 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT05G09950 | 1 | ||
| Prunus persica | Anchor point | many-to-1 | PPE_007G19930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G19990 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_007G19980 PPE_007G19990 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29830G00380 | 1 | |
| Anchor point | many-to-many | RC29830G00370 RC30170G06760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29830G00450 | 1 | ||
| Tree-based ortholog | 1-to-many | RC29830G00450 RC29830G00420 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL02G061740 SL02G082870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G032210 | 1 | ||
| Tree-based ortholog | 1-to-many | SL07G043650 SL07G043640 SL07G043660 ... | 7 | ||
| Solanum tuberosum | Anchor point | many-to-many | ST02G026220 ST02G009470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G008880 | 1 | ||
| Tree-based ortholog | 1-to-many | ST07G016740 ST07G016730 ST07G016720 ... | 6 | ||
| Thellungiella parvula | Anchor point | many-to-many | TP3G30990 TP1G18270 TP5G31430 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G30990 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP3G30990 | 1 | ||
| Vitis vinifera | Anchor point | many-to-many | VV04G00150 VV18G12180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G07300 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV04G00150 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G02550 | 1 | |
| Tree-based ortholog | 1-to-many | ZM05G17610 ZM01G02560 ZM01G02550 | 3 |