Integrative Orthology Viewer: TC0001G00680 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0001G00680 TC0002G04340 | 2 | |
Anchor point | TC0002G04340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | TC0001G00680 | 1 | ||
Tree-based ortholog | TC0001G00680 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00040G02150 | 1 | |
Anchor point | 1-to-1 | ATR_00001G01970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G02150 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00040G02150 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G37860 AL7G05220 AL7G05650 | 3 | |
Anchor point | 1-to-1 | AL7G05220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G05650 | 1 | ||
Tree-based ortholog | 1-to-1 | AL7G05220 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G17130 AT4G35260 AT4G35650 | 3 | |
Anchor point | 1-to-1 | AT4G35650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G35260 | 1 | ||
Tree-based ortholog | 1-to-1 | AT4G35650 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV6G01010 BV9G01090 | 2 | |
Anchor point | 1-to-many | BV6G01010 BV9G01080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G01010 | 1 | ||
Tree-based ortholog | 1-to-1 | BV4G10860 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G03030 BR08G13330 BR08G18300 ... | 4 | |
Anchor point | 1-to-many | BR08G18300 BR06G24290 BR10G17570 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR08G13330 BR01G03030 | 2 | ||
Tree-based ortholog | 1-to-1 | BR08G18300 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G29890 CRU_007G04340 CRU_007G04720 | 3 | |
Anchor point | 1-to-1 | CRU_007G04340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G04720 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_007G04340 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00020G01960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00020G01960 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00020G01960 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G07180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G07180 | 1 | ||
Tree-based ortholog | 1-to-1 | CR17G07180 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G02590 CL01G21030 | 2 | |
Anchor point | 1-to-many | CL02G03500 CL01G21030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21030 | 1 | ||
Tree-based ortholog | 1-to-1 | CL01G21030 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00023G01740 | 1 | |
Anchor point | 1-to-many | CS00023G01740 CS00017G02070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00023G01740 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00023G01740 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G10040 CM00020G00530 | 2 | |
Anchor point | 1-to-many | CM00019G01680 CM00007G10040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G10040 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00007G10040 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0009G12420 EG0009G18830 | 2 | |
Anchor point | 1-to-many | EG0009G18830 EG0009G12420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G12420 | 1 | ||
Tree-based ortholog | 1-to-many | EG0009G18830 EG0009G12420 | 2 | ||
Fragaria vesca | Anchor point | 1-to-many | FV1G12370 FV2G11910 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G11910 | 1 | ||
Tree-based ortholog | 1-to-1 | FV2G11910 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G04780 GM11G08920 GM14G00500 ... | 4 | |
Anchor point | 1-to-many | GM11G08920 GM16G22640 GM02G04780 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G08920 GM16G22640 | 2 | ||
Tree-based ortholog | 1-to-many | GM02G04780 GM16G22640 GM11G08920 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR08G04090 GR08G06100 GR12G15870 | 3 | |
Anchor point | 1-to-1 | GR02G20600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G06100 | 1 | ||
Tree-based ortholog | 1-to-1 | GR08G06100 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G011500 | 1 | |
Tree-based ortholog | 1-to-many | LJ5G011500 LJ4G005050 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G440130 MD02G010470 MD05G019530 ... | 5 | |
Anchor point | 1-to-many | MD02G010470 MD15G017100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD05G019530 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G440130 MD15G017100 MD02G010470 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06512G01810 ME07520G03280 | 2 | |
Anchor point | 1-to-many | ME06512G01810 ME07520G03280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06512G01810 | 1 | ||
Tree-based ortholog | 1-to-many | ME06512G01810 ME07520G03280 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G023740 MT8G074030 | 2 | |
Anchor point | 1-to-many | MT8G074030 MT5G023740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G023740 | 1 | ||
Tree-based ortholog | 1-to-many | MT8G074030 MT5G023740 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G38200 OS04G40310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G38200 | 1 | ||
Tree-based ortholog | 1-to-many | OS02G38200 OS04G40310 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G03220 | 1 | |
Tree-based ortholog | 1-to-1 | OL06G04120 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00101G00790 PP00152G00430 PP00212G00450 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00101G00790 PP00212G00450 PP00152G00430 | 3 | ||
Tree-based ortholog | 1-to-many | PP00212G00450 PP00152G00430 PP00101G00790 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G20430 PT05G09960 PT07G06400 ... | 4 | |
Anchor point | 1-to-many | PT05G09960 PT09G16520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G09960 PT07G06400 | 2 | ||
Tree-based ortholog | 1-to-many | PT05G09960 PT07G06400 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_007G20000 PPE_008G19400 | 2 | |
Anchor point | 1-to-many | PPE_008G19400 PPE_007G20000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G19400 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_007G20000 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29628G00020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29628G00020 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29628G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G082860 SL10G074500 | 2 | |
Anchor point | 1-to-many | SL01G112150 SL02G082860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G074500 | 1 | ||
Tree-based ortholog | 1-to-many | SL02G082860 SL10G074500 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G026210 ST10G017390 | 2 | |
Anchor point | 1-to-1 | ST02G026210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G017390 | 1 | ||
Tree-based ortholog | 1-to-many | ST02G026210 ST10G017390 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G30470 TP7G33040 TP7G33420 | 3 | |
Anchor point | 1-to-1 | TP7G33420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G33420 | 1 | ||
Tree-based ortholog | 1-to-1 | TP7G33420 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV03G04050 VV04G00190 | 2 | |
Anchor point | 1-to-many | VV03G04060 VV04G00190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G00190 | 1 | ||
Tree-based ortholog | 1-to-1 | VV04G00190 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM10G18880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G18880 | 1 | ||
Tree-based ortholog | 1-to-many | ZM05G32700 ZM04G17830 ZM10G18880 | 3 |