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Integrative Orthology Viewer:
TC0001G00290
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0001G00290 | 1 |  |
| Anchor point | TC0008G06140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0001G00290 | 1 | ||
| Tree-based ortholog | TC0001G00290 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00044G01050 | 1 | |
| Anchor point | 1-to-1 | ATR_00044G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G01050 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00044G01050 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL1G11550 AL2G04260 AL4G25600 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G38220 | 1 | ||
| Tree-based ortholog | 1-to-many | AL3G38150 AL8G34710 AL3G38220 | 3 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G11310 AT1G61560 AT2G39200 | 3 | |
| Anchor point | 1-to-many | AT2G17430 AT5G65970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G65970 | 1 | ||
| Tree-based ortholog | 1-to-many | AT2G17430 AT5G65970 AT2G17480 | 3 | ||
| Beta vulgaris | Anchor point | 1-to-many | BV6G13830 BV1G00850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G13830 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G13830 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR00G13020 BR01G26100 BR03G19700 ... | 8 | |
| Anchor point | 1-to-1 | BR10G17180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G08950 | 1 | ||
| Tree-based ortholog | 1-to-many | BR09G08930 BR10G17180 BR09G08950 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G10370 CRU_001G10380 CRU_002G03430 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G30350 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_003G30290 CRU_008G27670 CRU_003G30350 | 3 | ||
| Carica papaya | Anchor point | 1-to-many | CP00026G01560 CP00006G03450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G01560 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00006G03450 CP04321G00010 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G03680 | 1 | |
| Tree-based ortholog | 1-to-1 | CR01G03670 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL02G21160 CL03G02310 CL05G22020 | 3 | |
| Anchor point | 1-to-many | CL10G02030 CL01G21160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21160 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL10G02030 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00270G00080 | 1 | |
| Anchor point | 1-to-many | CS00017G02400 CS00002G06930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G02400 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00017G02400 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00004G03980 CM00082G00860 | 2 | |
| Anchor point | 1-to-many | CM00007G10150 CM00021G00160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G10150 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00021G00160 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0001G09410 EG0002G19980 EG0010G08320 | 3 | |
| Anchor point | 1-to-many | EG0010G22120 EG0009G18630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G18630 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0009G18630 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV0G51680 FV6G48440 FV7G24180 | 3 | |
| Anchor point | 1-to-1 | FV1G11930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G11930 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV1G11930 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G07110 GM10G35640 GM12G29310 ... | 8 | |
| Anchor point | 1-to-many | GM06G01800 GM16G21510 GM11G09270 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G21510 | 1 | ||
| Tree-based ortholog | 1-to-many | GM02G34220 GM09G32920 GM16G21510 ... | 6 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR01G13080 GR09G07860 GR10G20500 ... | 6 | |
| Anchor point | 1-to-many | GR02G11380 GR01G20000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G20000 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR01G20000 | 1 | ||
| Lotus japonicus | Anchor point | 1-to-1 | LJ1G043970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G043970 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G044050 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G016110 MD00G186970 MD04G007620 ... | 4 | |
| Anchor point | 1-to-many | MD09G007970 MD06G000660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G385370 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G385370 MD09G007970 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME01895G00140 ME02943G01180 ME07520G03600 | 3 | |
| Anchor point | 1-to-many | ME07520G03590 ME02943G01180 ME06512G02090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07520G03600 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME07520G03600 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT2G093750 MT3G115940 | 2 | |
| Anchor point | 1-to-many | MT3G115940 MT5G024700 MT8G073130 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G073130 | 1 | ||
| Tree-based ortholog | 1-to-many | MT2G030020 MT8G073130 MT5G024700 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS03G03700 OS06G29110 | 2 | |
| Anchor point | 1-to-1 | OS03G03700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G29110 OS03G03700 | 2 | ||
| Tree-based ortholog | 1-to-many | OS05G09050 OS10G39520 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL13G00410 | 1 | |
| Tree-based ortholog | 1-to-1 | OL13G00410 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00060G01010 PP00012G00320 PP00296G00240 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00099G00630 PP00024G00070 PP00210G00390 ... | 11 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G04140 PT09G01190 PT10G22050 ... | 4 | |
| Anchor point | 1-to-many | PT05G09920 PT02G00670 PT05G25430 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G09920 PT07G06430 | 2 | ||
| Tree-based ortholog | 1-to-many | PT00G16590 PT07G06430 PT05G09920 | 3 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_002G20800 PPE_005G00830 PPE_006G24730 | 3 | |
| Anchor point | 1-to-1 | PPE_007G20620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G20620 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_007G20620 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-many | RC28802G00010 RC30078G01440 RC30111G00380 ... | 4 | |
| Anchor point | 1-to-many | RC30170G07160 RC29830G00870 RC28592G00020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28592G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC28592G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL00G007200 | 1 | |
| Anchor point | 1-to-many | SL00G007200 SL02G082430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G082430 | 1 | ||
| Tree-based ortholog | 1-to-many | SL02G082430 SL00G007200 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST02G007200 ST02G025790 | 2 | |
| Anchor point | 1-to-1 | ST02G025790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G025790 | 1 | ||
| Tree-based ortholog | 1-to-many | ST02G025790 ST02G007200 | 2 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP1G09960 TP2G03050 | 2 | |
| Anchor point | 1-to-1 | TP2G30720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G30830 | 1 | ||
| Tree-based ortholog | 1-to-many | TP3G30760 TP2G30720 TP3G30830 | 3 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV06G05150 VV08G02630 VV18G12580 | 3 | |
| Anchor point | 1-to-many | VV07G06990 VV18G12600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G07000 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV07G07000 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM01G02060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G16400 ZM06G09690 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM06G09690 ZM05G16400 ZM01G20190 | 3 |