Integrative Orthology Viewer: TC0001G00190 (Theobroma cacao)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Theobroma cacao | Orthologous gene family | TC0001G00190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | TC0001G08700 TC0001G00190 | 2 | ||
Tree-based ortholog | TC0001G08700 TC0001G00190 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00022G01270 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00022G01270 | 1 | ||
Arabidopsis lyrata | Anchor point | N/A | AL3G38140 AL7G05450 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G38140 | 1 | ||
Tree-based ortholog | many-to-many | AL7G05450 AL3G38140 | 2 | ||
Arabidopsis thaliana | Anchor point | N/A | AT4G35460 AT2G17420 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G17420 | 1 | ||
Tree-based ortholog | many-to-many | AT4G35460 AT2G17420 | 2 | ||
Beta vulgaris | Anchor point | N/A | BV6G13990 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G13990 | 1 | ||
Tree-based ortholog | many-to-1 | BV6G13990 | 1 | ||
Brassica rapa | Anchor point | N/A | BR03G54740 BR06G24610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G08920 | 1 | ||
Tree-based ortholog | many-to-many | BR03G54740 BR08G18360 BR09G08910 ... | 5 | ||
Capsella rubella | Anchor point | N/A | CRU_007G04550 CRU_003G30280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G04550 | 1 | ||
Tree-based ortholog | many-to-many | CRU_007G04550 CRU_003G30280 | 2 | ||
Carica papaya | Anchor point | N/A | CP00006G03390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00006G03390 | 1 | ||
Tree-based ortholog | many-to-1 | CP00006G03390 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G10160 | 1 | |
Tree-based ortholog | many-to-1 | CR07G10160 | 1 | ||
Citrullus lanatus | Anchor point | N/A | CL01G21200 CL10G02050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G21200 | 1 | ||
Tree-based ortholog | many-to-many | CL10G02050 CL01G21200 | 2 | ||
Citrus sinensis | Anchor point | N/A | CS00017G02510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00017G02510 | 1 | ||
Tree-based ortholog | many-to-1 | CS00017G02510 | 1 | ||
Cucumis melo | Anchor point | N/A | CM00007G10200 CM00021G00140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G10200 | 1 | ||
Tree-based ortholog | many-to-many | CM00021G00140 CM00007G10200 | 2 | ||
Eucalyptus grandis | Anchor point | N/A | EG0010G22210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G22230 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G22230 EG0010G22210 | 2 | ||
Fragaria vesca | Anchor point | N/A | FV1G11720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G11720 | 1 | ||
Tree-based ortholog | many-to-1 | FV1G11720 | 1 | ||
Glycine max | Anchor point | N/A | GM16G21630 GM01G36070 GM11G09350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM01G36070 GM11G09350 | 2 | ||
Tree-based ortholog | many-to-many | GM01G36070 GM11G09350 GM16G21630 | 3 | ||
Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G03340 | 1 | |
Tree-based ortholog | many-to-1 | GR07G03340 | 1 | ||
Malus domestica | Anchor point | N/A | MD02G008990 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G032630 MD02G008990 MD00G098040 ... | 4 | ||
Tree-based ortholog | many-to-many | MD00G218510 MD00G098040 MD00G032630 ... | 4 | ||
Manihot esculenta | Anchor point | N/A | ME07520G03680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07520G03680 | 1 | ||
Tree-based ortholog | many-to-1 | ME07520G03680 | 1 | ||
Medicago truncatula | Anchor point | N/A | MT5G024900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G024900 | 1 | ||
Tree-based ortholog | many-to-1 | MT5G024900 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G48290 | 1 | |
Tree-based ortholog | many-to-many | OS06G22140 OS02G48290 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL17G00200 | 1 | |
Tree-based ortholog | many-to-1 | OL17G00200 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00008G01560 PP00008G01530 | 2 | |
Tree-based ortholog | many-to-many | PP00008G01530 PP00008G01560 | 2 | ||
Populus trichocarpa | Anchor point | N/A | PT01G45680 PT11G14510 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT01G45680 PT11G14510 | 2 | ||
Tree-based ortholog | many-to-many | PT11G14510 PT01G45680 | 2 | ||
Prunus persica | Anchor point | N/A | PPE_007G20800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G20800 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_007G20800 | 1 | ||
Ricinus communis | Anchor point | N/A | RC29682G00050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29682G00050 | 1 | ||
Tree-based ortholog | many-to-1 | RC29682G00050 | 1 | ||
Solanum lycopersicum | Anchor point | N/A | SL02G082250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G032000 | 1 | ||
Tree-based ortholog | many-to-many | SL03G032000 SL02G082250 | 2 | ||
Solanum tuberosum | Anchor point | N/A | ST03G008660 ST02G025620 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G008660 | 1 | ||
Tree-based ortholog | many-to-many | ST03G008660 ST02G025620 | 2 | ||
Thellungiella parvula | Anchor point | N/A | TP3G30750 TP7G33230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G33230 | 1 | ||
Tree-based ortholog | many-to-many | TP7G33230 TP3G30750 | 2 | ||
Vitis vinifera | Anchor point | N/A | VV04G04700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G07240 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G07240 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G38360 | 1 | |
Tree-based ortholog | many-to-many | ZM06G18300 ZM05G38360 ZM04G34300 | 3 |