Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ST11G015600
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST11G015600 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | ST09G010380 ST11G015600 | 2 | ||
| Tree-based ortholog | ST11G018640 ST11G015600 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00040G01260 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00040G01260 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G21730 | 1 | |
| Tree-based ortholog | many-to-1 | AL4G21730 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G36310 | 1 | |
| Tree-based ortholog | many-to-1 | AT2G36310 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G12330 | 1 | |
| Tree-based ortholog | many-to-1 | BV7G12330 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G17920 | 1 | |
| Tree-based ortholog | many-to-many | BR03G17920 BR05G08710 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G17490 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_004G17490 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00005G00410 | 1 | |
| Tree-based ortholog | many-to-1 | CP00005G00410 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G05020 | 1 | |
| Tree-based ortholog | many-to-1 | CR06G05020 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G09840 | 1 | |
| Tree-based ortholog | many-to-1 | CL04G09840 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00056G00680 | 1 | |
| Tree-based ortholog | many-to-1 | CS00056G00680 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00068G00830 | 1 | |
| Tree-based ortholog | many-to-1 | CM00068G00830 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G12410 | 1 | |
| Tree-based ortholog | many-to-1 | EG0001G12410 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G18560 | 1 | |
| Tree-based ortholog | many-to-1 | FV6G18560 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G37830 GM03G35166 | 2 | |
| Tree-based ortholog | many-to-many | GM19G37830 GM14G33886 GM03G35166 | 3 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G40490 | 1 | |
| Tree-based ortholog | many-to-many | GR09G40490 GR06G15630 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G051280 MD00G474800 | 2 | |
| Tree-based ortholog | many-to-many | MD00G092060 MD00G051280 MD00G474800 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME12607G00010 | 1 | |
| Tree-based ortholog | many-to-1 | ME12607G00010 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G104270 | 1 | |
| Tree-based ortholog | many-to-1 | MT7G104270 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G44370 | 1 | |
| Tree-based ortholog | many-to-many | OS09G39440 OS08G44370 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G02110 | 1 | |
| Tree-based ortholog | many-to-1 | OL05G02110 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00005G01000 PP00140G00490 | 2 | |
| Tree-based ortholog | many-to-many | PP00140G00490 PP00005G01000 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G08340 | 1 | |
| Tree-based ortholog | many-to-1 | PT06G08340 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G13600 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_007G13600 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29625G00030 | 1 | |
| Tree-based ortholog | many-to-1 | RC29625G00030 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G009690 | 1 | |
| Tree-based ortholog | many-to-1 | SL05G020040 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G18550 | 1 | |
| Tree-based ortholog | many-to-1 | TP4G18550 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G08250 | 1 | |
| Tree-based ortholog | many-to-1 | TC0005G08250 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G11670 | 1 | |
| Tree-based ortholog | many-to-1 | VV08G11670 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G36510 | 1 | |
| Tree-based ortholog | many-to-many | ZM02G27550 ZM04G10610 ZM01G36510 | 3 |