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Integrative Orthology Viewer:
ST07G023520
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST07G023520 ST12G006530 | 2 |  |
| Anchor point | ST12G006530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ST07G023520 | 1 | ||
| Tree-based ortholog | ST07G023520 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G01250 ATR_00011G00670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00061G00930 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00061G00930 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G29820 AL8G11030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G29820 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL3G29820 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G27680 AT5G48300 | 2 | |
| Anchor point | 1-to-1 | AT5G48300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G48300 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G48300 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G08470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G08470 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV9G08470 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G12010 BR06G30610 BR06G39400 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G03260 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR07G03260 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G25130 CRU_007G01030 CRU_008G07780 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G07780 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_008G07780 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00057G00520 CP00136G00730 CP01000G00030 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00136G00730 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00136G00730 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR13G01480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G10250 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR03G10250 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G03060 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G03060 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G05470 CS00647G00040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00647G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00647G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00066G00500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00066G00500 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00066G00500 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G26880 EG0006G12850 EG0011G04650 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G11520 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0011G11520 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G01490 FV6G35800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G35800 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G35800 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G47460 GM06G03340 GM14G01290 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM14G01290 GM02G47460 | 2 | ||
| Tree-based ortholog | 1-to-many | GM14G01290 GM02G47460 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR00G00660 GR01G22450 GR07G16370 | 3 | |
| Anchor point | 1-to-many | GR01G22450 GR07G16370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G22450 | 1 | ||
| Tree-based ortholog | 1-to-many | GR07G16370 GR00G00660 GR01G22450 | 3 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G029600 LJ2G049420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G049420 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ2G049420 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G052400 MD00G313390 MD16G013990 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G052400 MD17G010720 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G052400 MD17G010720 MD00G030020 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03805G00050 ME05214G00530 ME07012G00820 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05214G00530 | 1 | ||
| Tree-based ortholog | 1-to-many | ME03805G00050 ME05214G00530 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G082150 MT5G097010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G082150 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT3G082150 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G12660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G25734 | 1 | ||
| Tree-based ortholog | 1-to-many | OS09G12660 OS08G25734 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03120 | 1 | |
| Tree-based ortholog | 1-to-1 | OL07G03120 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00002G01820 PP00002G02010 PP00076G00400 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00076G00400 PP00002G02010 PP00239G00160 | 3 | ||
| Tree-based ortholog | 1-to-many | PP00002G02010 PP00076G00400 PP00239G00160 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G03340 PT04G15710 PT05G22970 ... | 4 | |
| Anchor point | 1-to-1 | PT14G17180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G17180 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT14G17180 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G14630 PPE_001G38420 PPE_003G17430 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G17430 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_003G17430 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30005G00320 | 1 | |
| Anchor point | 1-to-1 | RC30005G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30005G00320 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30005G00320 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G056140 SL12G011120 | 2 | |
| Anchor point | 1-to-many | SL07G056140 SL12G011120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G056140 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL07G056140 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G18660 TP3G23080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G18660 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP3G23080 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G19550 TC0008G02960 | 2 | |
| Anchor point | 1-to-1 | TC0001G19550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G19550 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0001G19550 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV12G10130 VV18G09240 | 2 | |
| Anchor point | 1-to-1 | VV12G10130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G10130 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV12G10130 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G39790 ZM02G29060 ZM03G36860 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G39790 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM08G14950 | 1 |