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Integrative Orthology Viewer:
ST03G028840
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST03G028840 ST12G018720 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | ST03G028840 | 1 | ||
| Tree-based ortholog | ST03G028840 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00045G02790 ATR_00110G00330 | 2 | |
| Anchor point | N/A | ATR_00110G00330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00045G02790 ATR_00110G00330 | 2 | ||
| Tree-based ortholog | 1-to-many | ATR_00045G02790 ATR_00110G00330 | 2 | ||
| Arabidopsis lyrata | Anchor point | N/A | AL8G27350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G27350 | 1 | ||
| Tree-based ortholog | 1-to-many | AL3G01130 AL8G27350 AL6G15340 | 3 | ||
| Arabidopsis thaliana | Anchor point | N/A | AT5G61170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G61170 | 1 | ||
| Tree-based ortholog | 1-to-many | AT3G02080 AT5G61170 AT5G15520 | 3 | ||
| Beta vulgaris | Anchor point | N/A | BV5G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G00030 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV5G00030 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR09G05520 | 1 | |
| Anchor point | N/A | BR02G38070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G40740 | 1 | ||
| Tree-based ortholog | 1-to-many | BR05G35870 BR01G34790 BR09G05520 ... | 6 | ||
| Capsella rubella | Anchor point | N/A | CRU_008G21260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G21260 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_003G01120 CRU_008G21260 CRU_006G13350 | 3 | ||
| Carica papaya | Anchor point | N/A | CP00014G01640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00624G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00014G01640 CP00624G00010 | 2 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G08620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G08620 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR02G08620 | 1 | ||
| Citrullus lanatus | Anchor point | N/A | CL11G14200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G14200 | 1 | ||
| Tree-based ortholog | 1-to-many | CL09G06520 CL11G14200 | 2 | ||
| Citrus sinensis | Anchor point | N/A | CS00015G02420 CS00122G00300 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G02420 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00122G00300 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00026G01620 | 1 | |
| Anchor point | N/A | CM00051G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G00700 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00049G00070 CM00051G00700 CM00026G01620 | 3 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G20940 | 1 | |
| Anchor point | N/A | EG0009G16970 EG0011G20940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G20940 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0009G16970 EG0011G20940 | 2 | ||
| Fragaria vesca | Anchor point | N/A | FV5G12470 FV6G42840 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV6G42840 FV5G12470 | 2 | ||
| Tree-based ortholog | 1-to-1 | FV6G42850 | 1 | ||
| Glycine max | Anchor point | N/A | GM19G03520 GM13G06070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G06070 GM11G25910 GM04G16660 ... | 4 | ||
| Tree-based ortholog | 1-to-many | GM13G06070 GM19G03520 GM11G25910 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G10840 GR04G26890 GR13G14560 | 3 | |
| Anchor point | N/A | GR03G10060 GR06G26770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G14560 GR04G26890 GR02G10840 | 3 | ||
| Tree-based ortholog | 1-to-many | GR04G26890 GR02G10840 GR06G26770 ... | 4 | ||
| Malus domestica | Anchor point | N/A | MD06G016310 MD09G004560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G130890 MD00G474760 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G326670 MD10G007350 MD00G231530 ... | 14 | ||
| Manihot esculenta | Anchor point | N/A | ME04043G02240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06609G00350 ME06871G00110 | 2 | ||
| Tree-based ortholog | 1-to-1 | ME04043G02240 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G040740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G013635 | 1 | ||
| Tree-based ortholog | 1-to-many | MT3G013635 MT8G040740 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G31090 | 1 | |
| Anchor point | N/A | OS03G31090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G31090 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G31090 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02450 | 1 | |
| Tree-based ortholog | 1-to-1 | OL11G02450 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00084G00760 PP00021G01740 PP00098G01020 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00098G01020 PP00034G00680 PP00084G00760 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT15G05610 PT17G09220 | 2 | |
| Anchor point | N/A | PT15G05610 PT17G09220 PT04G11880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G05610 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT15G05610 | 1 | ||
| Prunus persica | Anchor point | N/A | PPE_005G20690 PPE_003G23660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G20690 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_003G23660 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC29630G00270 RC29630G00280 | 2 | |
| Tree-based ortholog | 1-to-many | RC29630G00270 RC29630G00280 RC30167G00230 | 3 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G115360 SL12G039120 | 2 | |
| Anchor point | N/A | SL03G115360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G115360 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL03G115360 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G35020 | 1 | |
| Anchor point | N/A | TP6G28580 TP2G24410 TP6G35020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G24410 | 1 | ||
| Tree-based ortholog | 1-to-many | TP3G01140 TP2G24410 TP6G28580 ... | 4 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G17690 | 1 | |
| Anchor point | N/A | TC0003G10120 TC0002G33260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G17690 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0007G17690 TC0003G10120 | 2 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G10270 | 1 | |
| Anchor point | N/A | VV17G02940 VV01G10270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G02940 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV17G02940 | 1 |