Integrative Orthology Viewer: ST02G028990 (Solanum tuberosum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum tuberosum | Orthologous gene family | ST02G010810 ST02G028990 | 2 | |
Anchor point | ST02G010810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ST02G028990 | 1 | ||
Tree-based ortholog | ST02G028990 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00156G00380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00156G00380 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00156G00380 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G01710 | 1 | |
Anchor point | 1-to-many | AL3G01710 AL6G15940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G01710 | 1 | ||
Tree-based ortholog | 1-to-1 | AL3G01710 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G02540 AT5G38470 | 2 | |
Anchor point | 1-to-many | AT5G16090 AT3G02540 AT5G38470 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G02540 | 1 | ||
Tree-based ortholog | 1-to-1 | AT3G02540 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G07070 | 1 | |
Anchor point | 1-to-1 | BV2G07070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G07070 | 1 | ||
Tree-based ortholog | 1-to-1 | BV2G07070 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G00230 BR03G28960 BR04G08260 | 3 | |
Anchor point | 1-to-many | BR02G00230 BR10G19130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G28960 | 1 | ||
Tree-based ortholog | 1-to-1 | BR03G28960 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G01550 CRU_007G36090 | 2 | |
Anchor point | 1-to-1 | CRU_003G01550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G01550 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_003G01550 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00001G01780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G01780 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00001G01780 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G02560 | 1 | |
Tree-based ortholog | 1-to-1 | CR08G02560 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G23870 | 1 | |
Anchor point | 1-to-1 | CL05G23870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23870 | 1 | ||
Tree-based ortholog | 1-to-1 | CL05G23870 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00019G00390 CS00071G00530 | 2 | |
Anchor point | 1-to-1 | CS00071G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00071G00530 | 1 | ||
Tree-based ortholog | 1-to-many | CS00071G00530 CS00019G00390 | 2 | ||
Cucumis melo | Anchor point | 1-to-1 | CM00016G05720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00072G00020 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00016G05720 | 1 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G24710 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G24710 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G01810 FV6G40730 | 2 | |
Anchor point | 1-to-many | FV6G40730 FV0G01810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G01810 | 1 | ||
Tree-based ortholog | 1-to-1 | FV6G40730 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM20G24850 | 1 | |
Anchor point | 1-to-many | GM20G24850 GM10G42180 GM18G53470 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G24850 GM10G42180 GM01G20670 ... | 4 | ||
Tree-based ortholog | 1-to-many | GM01G20670 GM08G32090 GM20G24850 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR13G07650 GR13G07660 GR13G07680 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G07660 GR13G07690 GR13G07680 ... | 4 | ||
Tree-based ortholog | 1-to-many | GR13G07690 GR13G07680 GR13G07660 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G041130 | 1 | |
Anchor point | 1-to-1 | LJ1G041130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G041130 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ1G066270 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G080360 MD09G006160 MD13G002830 ... | 4 | |
Anchor point | 1-to-many | MD09G006160 MD13G002830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G006160 | 1 | ||
Tree-based ortholog | 1-to-many | MD17G006570 MD00G378240 MD00G080360 ... | 4 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04043G00930 ME06871G00730 ME08359G00180 | 3 | |
Anchor point | 1-to-many | ME06871G00730 ME04043G00930 ME08359G00180 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04043G00930 ME06871G00730 | 2 | ||
Tree-based ortholog | 1-to-many | ME06871G00730 ME04043G00930 ME06005G00120 ... | 4 | ||
Medicago truncatula | Anchor point | 1-to-many | MT7G407040 MT1G111090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G111090 | 1 | ||
Tree-based ortholog | 1-to-1 | MT1G111090 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G15360 OS09G24200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G15360 | 1 | ||
Tree-based ortholog | 1-to-many | OS06G15360 OS09G24200 OS08G33340 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL10G01900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01900 | 1 | ||
Tree-based ortholog | 1-to-1 | OL10G01900 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00058G00800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00058G00800 | 1 | ||
Tree-based ortholog | 1-to-many | PP00286G00320 PP00003G00230 PP00003G00270 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G10070 PT08G11970 PT17G11400 | 3 | |
Anchor point | 1-to-many | PT08G11970 PT17G11400 PT04G10070 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G10070 PT17G11400 | 2 | ||
Tree-based ortholog | 1-to-many | PT04G10070 PT17G11400 PT08G11970 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G31920 PPE_001G31930 PPE_003G21740 | 3 | |
Anchor point | 1-to-many | PPE_001G31920 PPE_003G21740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G21740 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_003G21740 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30205G00110 | 1 | |
Anchor point | 1-to-1 | RC30205G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30205G00110 | 1 | ||
Tree-based ortholog | 1-to-many | RC30205G00110 RC28883G00010 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL02G063130 SL02G085840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G085840 | 1 | ||
Tree-based ortholog | 1-to-1 | SL02G085840 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G01570 TP7G03580 | 2 | |
Anchor point | 1-to-1 | TP7G03580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01570 | 1 | ||
Tree-based ortholog | 1-to-1 | TP3G01570 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G35440 | 1 | |
Anchor point | 1-to-many | TC0004G14150 TC0002G35440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35440 | 1 | ||
Tree-based ortholog | 1-to-many | TC0002G35440 TC0004G14150 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G07860 VV14G08170 | 2 | |
Anchor point | 1-to-many | VV01G07860 VV14G08170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G08170 | 1 | ||
Tree-based ortholog | 1-to-1 | VV14G08170 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G30390 ZM07G13630 ZM09G16350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G16350 | 1 | ||
Tree-based ortholog | 1-to-many | ZM09G16350 ZM02G30390 ZM07G13630 | 3 |