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Integrative Orthology Viewer:
ST01G040990
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST01G040990 ST12G030250 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | ST01G040990 | 1 | ||
| Tree-based ortholog | ST01G040990 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00013G02770 ATR_00070G01230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00070G01230 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR_00095G00290 ATR_00031G00110 ATR_00070G01230 | 3 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G23500 AL1G37980 AL7G30710 | 3 | |
| Anchor point | N/A | AL1G23500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G37980 | 1 | ||
| Tree-based ortholog | 1-to-many | AL1G37980 AL1G23500 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G22020 AT1G36370 AT4G13890 ... | 4 | |
| Anchor point | N/A | AT1G22020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G36370 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G36370 AT1G22020 | 2 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G24430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G24430 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G24430 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G21520 BR08G05390 BR08G07890 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G07890 | 1 | ||
| Tree-based ortholog | 1-to-many | BR08G07890 BR05G21520 BR08G24400 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G20630 CRU_001G32090 CRU_007G27340 ... | 4 | |
| Anchor point | N/A | CRU_001G20630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G32090 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_001G32090 CRU_001G20630 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00049G01160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00049G01160 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00049G01160 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G11920 | 1 | |
| Tree-based ortholog | 1-to-1 | CR06G11920 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL05G10810 CL11G09550 | 2 | |
| Anchor point | N/A | CL05G10810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G10810 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL05G10810 | 1 | ||
| Citrus sinensis | Anchor point | N/A | CS00004G01500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00651G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00004G01500 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00013G00680 CM00038G00860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00038G00860 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00038G00790 CM00038G00860 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G05320 EG0005G05360 EG0006G31880 ... | 4 | |
| Anchor point | N/A | EG0009G23140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G23140 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0009G23140 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G33200 FV7G20270 | 2 | |
| Anchor point | N/A | FV0G33200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G33200 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV0G33200 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G43360 GM06G11300 GM08G11490 ... | 5 | |
| Anchor point | N/A | GM06G11300 GM12G29171 GM08G20050 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G29171 GM08G20050 | 2 | ||
| Tree-based ortholog | 1-to-many | GM12G29171 GM08G20050 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G09210 GR05G24210 GR09G24160 ... | 4 | |
| Anchor point | N/A | GR05G24210 GR12G15160 GR09G24160 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR05G24210 GR12G15160 | 2 | ||
| Tree-based ortholog | 1-to-many | GR03G08770 GR13G24570 GR07G29350 | 3 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G030150 | 1 | |
| Anchor point | N/A | LJ6G030150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G030150 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ6G030150 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G194780 MD00G309820 MD00G444470 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G309820 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G194770 MD00G254710 MD00G254730 ... | 10 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02421G00880 ME03332G01020 ME06914G01010 ... | 4 | |
| Anchor point | N/A | ME04065G00300 ME06914G01010 ME12455G00720 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06914G01010 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06914G01010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G006570 MT3G073470 MT8G081510 | 3 | |
| Anchor point | N/A | MT2G006570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G006570 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT2G006570 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G65410 OS05G35440 OS12G22030 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G65410 | 1 | ||
| Tree-based ortholog | 1-to-many | OS01G65410 OS05G35440 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL03G00930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G00930 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL03G00930 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00029G00530 PP00201G00220 PP00227G00700 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00029G00530 PP00291G00190 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00201G00220 PP00070G00470 PP00227G00700 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G21200 PT02G09020 PT05G17080 | 3 | |
| Anchor point | N/A | PT05G17080 PT02G09020 PT01G21200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G21200 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT01G21200 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G51200 PPE_001G51210 | 2 | |
| Anchor point | N/A | PPE_001G51200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_001G51200 PPE_001G51210 | 2 | ||
| Tree-based ortholog | 1-to-many | PPE_001G51210 PPE_001G51200 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29222G00010 RC29908G01060 | 2 | |
| Anchor point | N/A | RC29908G01060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29222G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29222G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G104000 SL12G098490 | 2 | |
| Anchor point | N/A | SL01G104000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G104000 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL01G104000 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G19530 TP1G30960 TP7G11730 | 3 | |
| Anchor point | N/A | TP1G19530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G30960 | 1 | ||
| Tree-based ortholog | 1-to-many | TP1G30960 TP1G19530 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G08510 TC0008G11160 | 2 | |
| Anchor point | N/A | TC0002G08510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G11160 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0002G08510 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G02870 | 1 | |
| Anchor point | N/A | VV12G04350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G02870 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV12G04350 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G27890 ZM03G25430 ZM04G05210 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G25430 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM03G25430 ZM08G30680 | 2 |