Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ST01G030130
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST01G030130 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | ST01G030130 | 1 | ||
| Tree-based ortholog | ST01G030130 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00059G00890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00059G00890 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00059G00890 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G31390 | 1 | |
| Anchor point | N/A | AL5G31390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G31390 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL5G31390 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G60670 | 1 | |
| Anchor point | N/A | AT3G60670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G60670 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G60670 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G16500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G16500 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV5G16500 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR04G01330 | 1 | |
| Anchor point | N/A | BR04G01330 BR09G40160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G01330 | 1 | ||
| Tree-based ortholog | 1-to-many | BR04G01330 BR09G40160 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G26010 | 1 | |
| Anchor point | N/A | CRU_005G26010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G26010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_005G26010 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00030G01160 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00029G01300 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G01900 | 1 | |
| Tree-based ortholog | 1-to-1 | CR02G06290 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL06G02600 | 1 | |
| Anchor point | N/A | CL06G02600 CL01G03650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G02600 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL06G02600 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00001G01430 | 1 | |
| Anchor point | N/A | CS00001G01430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G01430 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00001G01430 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00047G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00047G00120 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00047G00120 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0005G12380 | 1 | |
| Anchor point | N/A | EG0005G04110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G12380 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0005G12380 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G11840 | 1 | |
| Anchor point | N/A | FV7G11840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G11840 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV7G11840 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM01G17580 GM11G17770 | 2 | |
| Anchor point | N/A | GM11G03370 GM01G17580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G17770 GM01G17580 | 2 | ||
| Tree-based ortholog | 1-to-many | GM11G17770 GM01G17580 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G08960 | 1 | |
| Anchor point | N/A | GR03G16980 GR04G16350 GR08G23700 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G08960 | 1 | ||
| Tree-based ortholog | 1-to-many | GR01G17490 GR04G16350 GR07G08960 | 3 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G014060 | 1 | |
| Tree-based ortholog | 1-to-many | LJ6G014060 LJ6G018180 | 2 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G511750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G511750 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD00G511750 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME04450G00100 ME08265G05020 | 2 | |
| Anchor point | N/A | ME08265G05020 ME04450G00100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08265G05020 ME04450G00100 | 2 | ||
| Tree-based ortholog | 1-to-many | ME04450G00100 ME08265G05020 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G055210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G055210 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT2G055210 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS02G44260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G09070 | 1 | ||
| Tree-based ortholog | 1-to-many | OS02G09070 OS06G45540 OS02G07650 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G03290 | 1 | |
| Tree-based ortholog | 1-to-1 | OL20G03290 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00560G00010 PP00441G00050 PP00003G02470 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00003G02470 PP00441G00050 PP00003G02440 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G14490 PT14G05930 | 2 | |
| Anchor point | N/A | PT01G15920 PT03G07560 PT14G05930 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G05930 PT02G14490 | 2 | ||
| Tree-based ortholog | 1-to-many | PT02G14490 PT14G05930 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G13770 | 1 | |
| Anchor point | N/A | PPE_002G13770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G13770 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G13770 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30174G00920 | 1 | |
| Anchor point | N/A | RC30174G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G00920 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30174G00920 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G091000 | 1 | |
| Anchor point | N/A | SL01G091000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G091000 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL01G091000 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G02570 | 1 | |
| Anchor point | N/A | TP5G02570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G02570 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP5G02570 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G37650 | 1 | |
| Anchor point | N/A | TC0001G37650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G37650 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0001G37650 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV15G09130 | 1 | |
| Anchor point | N/A | VV02G00140 VV15G09130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G09130 | 1 | ||
| Tree-based ortholog | 1-to-many | VV03G08200 VV15G09130 | 2 | ||
| Zea mays | Anchor point | N/A | ZM04G20550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G21570 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM05G21570 ZM05G20470 | 2 |